Gene PP_1942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1942 
Symbol 
ID1043118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp2197023 
End bp2197985 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content52% 
IMG OID637145347 
ProductLysR family transcriptional regulator 
Protein accessionNP_744094 
Protein GI26988669 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000680141 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGATATCA GAAGATTAGA CCTCAATTTG CTGCTCCTTC TCGATGAGCT GTACCGGGAA 
CAGAACCTCT CCGCTGCCGC TCGCCGCCTT GGAATGAGCC AGCCGATGGC GAGTGCGAGC
CTCCGTAGGC TGCGGGAGTA TTTCGAGGAT CAGCTTTTTC TTTCGACGGG GCGCGGGATG
AGACCCACCC CCTTCACGGT ATCGATAGCT GCATCAGTCA GCGGGGTGTT GGAGCGGATC
AAACACGAAA TTCTGGCCAA ACCTGCGTTC CAGCCGCGGC AAAGTGACCG TCTGTTCACA
ATCAGTACGT CTGACATAGG GGCGTTGATT TTTGTACCAC CAATCCTCAG GCGCCTTGGA
GAGGATGCAC CCAATACCGA TCTCCGCTGC GTCTCACTCC CCCATCAGCA ATTGGAACAG
GCGTTGGAGC AAGGTAGCGT AGATTTGGCC GTAGGGTATT TTCCAGACCT CCAGGGAGAG
CAGGTCAAAA CCCAGGCTCT CTTCGAGCAC AATTTCACCT GCATCGTCCG GCGCAACCAT
CCCTCAATTG GAGATACGTT GAGCCTAGAG CAGTTCCTAG CAGCGGATCA CCTTGTCGTG
AACCAAGAAG GTCGTAGCCA GGAAATCTTT GAGCAACGTC TAAGGGAACT CAAGTTACAG
CGCCGAGTTC ATTTGGAGGT TCCTCACTTC ATGAGCGTTC CTCAATTGAT TGCTTCTACC
AACATGGTTG CGACTGTTCC GCTATCCCTT GGAGTATGGT TTGCAAGCGA GCAAATAAAA
ATGCTGACAC CTCCTATCGA GGTGGAGAAA TTTGAGTTGA AATTGCACTG GCACCGGCAA
ATGGAAGACG ATCCAGCTGT CTCGTGGTTT CGCAATGCCG TTTTTGAAGA ACTCTGCAAT
CTAGATCCGA CATTTGCCAT GTCACCCGAT TATGCAGATC GAAAAGAAAA CGCAAACCCC
TGA
 
Protein sequence
MDIRRLDLNL LLLLDELYRE QNLSAAARRL GMSQPMASAS LRRLREYFED QLFLSTGRGM 
RPTPFTVSIA ASVSGVLERI KHEILAKPAF QPRQSDRLFT ISTSDIGALI FVPPILRRLG
EDAPNTDLRC VSLPHQQLEQ ALEQGSVDLA VGYFPDLQGE QVKTQALFEH NFTCIVRRNH
PSIGDTLSLE QFLAADHLVV NQEGRSQEIF EQRLRELKLQ RRVHLEVPHF MSVPQLIAST
NMVATVPLSL GVWFASEQIK MLTPPIEVEK FELKLHWHRQ MEDDPAVSWF RNAVFEELCN
LDPTFAMSPD YADRKENANP