Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1942 |
Symbol | |
ID | 1043118 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 2197023 |
End bp | 2197985 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637145347 |
Product | LysR family transcriptional regulator |
Protein accession | NP_744094 |
Protein GI | 26988669 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.000000680141 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGGATATCA GAAGATTAGA CCTCAATTTG CTGCTCCTTC TCGATGAGCT GTACCGGGAA CAGAACCTCT CCGCTGCCGC TCGCCGCCTT GGAATGAGCC AGCCGATGGC GAGTGCGAGC CTCCGTAGGC TGCGGGAGTA TTTCGAGGAT CAGCTTTTTC TTTCGACGGG GCGCGGGATG AGACCCACCC CCTTCACGGT ATCGATAGCT GCATCAGTCA GCGGGGTGTT GGAGCGGATC AAACACGAAA TTCTGGCCAA ACCTGCGTTC CAGCCGCGGC AAAGTGACCG TCTGTTCACA ATCAGTACGT CTGACATAGG GGCGTTGATT TTTGTACCAC CAATCCTCAG GCGCCTTGGA GAGGATGCAC CCAATACCGA TCTCCGCTGC GTCTCACTCC CCCATCAGCA ATTGGAACAG GCGTTGGAGC AAGGTAGCGT AGATTTGGCC GTAGGGTATT TTCCAGACCT CCAGGGAGAG CAGGTCAAAA CCCAGGCTCT CTTCGAGCAC AATTTCACCT GCATCGTCCG GCGCAACCAT CCCTCAATTG GAGATACGTT GAGCCTAGAG CAGTTCCTAG CAGCGGATCA CCTTGTCGTG AACCAAGAAG GTCGTAGCCA GGAAATCTTT GAGCAACGTC TAAGGGAACT CAAGTTACAG CGCCGAGTTC ATTTGGAGGT TCCTCACTTC ATGAGCGTTC CTCAATTGAT TGCTTCTACC AACATGGTTG CGACTGTTCC GCTATCCCTT GGAGTATGGT TTGCAAGCGA GCAAATAAAA ATGCTGACAC CTCCTATCGA GGTGGAGAAA TTTGAGTTGA AATTGCACTG GCACCGGCAA ATGGAAGACG ATCCAGCTGT CTCGTGGTTT CGCAATGCCG TTTTTGAAGA ACTCTGCAAT CTAGATCCGA CATTTGCCAT GTCACCCGAT TATGCAGATC GAAAAGAAAA CGCAAACCCC TGA
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Protein sequence | MDIRRLDLNL LLLLDELYRE QNLSAAARRL GMSQPMASAS LRRLREYFED QLFLSTGRGM RPTPFTVSIA ASVSGVLERI KHEILAKPAF QPRQSDRLFT ISTSDIGALI FVPPILRRLG EDAPNTDLRC VSLPHQQLEQ ALEQGSVDLA VGYFPDLQGE QVKTQALFEH NFTCIVRRNH PSIGDTLSLE QFLAADHLVV NQEGRSQEIF EQRLRELKLQ RRVHLEVPHF MSVPQLIAST NMVATVPLSL GVWFASEQIK MLTPPIEVEK FELKLHWHRQ MEDDPAVSWF RNAVFEELCN LDPTFAMSPD YADRKENANP
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