Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1937 |
Symbol | |
ID | 1043123 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 2189200 |
End bp | 2192388 |
Gene Length | 3189 bp |
Protein Length | 1062 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637145343 |
Product | helicase, putative |
Protein accession | NP_744090 |
Protein GI | 26988665 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.00000134724 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGCCGCTCA ATCTGGGTGA GCGCACCGTT CATTCAGTGG TTGATCGAGA TCTCTGTAAT GAATGGGGAT CGTTGATTGT GACCGGCTAC AGCGGTCTAG AGCAGCTTAT TCAGCTCATC ACTGGCCGTG GGGTAGGGAG GACGCCAATG CGCATCATCC TTGGCTCAGA CCCCGTCACC GTTGAAAACC CCAAGATCAA TCTCGGGCGC TACGACTTTT CAGAGGAAAT GCGAGAGTAC TGGCTCAAGC GCGGGATCTC GCTAGCGCTG TGTGGCCAAG TACTACATTG CATCGAGCTG ATTCGCGCCG GTCACGTGCG AATTCGTTAC CCGACAGGGT ACAGACGGCT ACATGCAAAA ATGTACTGCT CCGCTGGAGC AGTGACGCTT GGGTCCAGCA ACTACACTGG ACCAGGTTTA CATACTCAGC ATGAAGCGAA CGTGCGCTTC ACCTCTGGGG AAAGAGCGCG CTTTGTTGAG ACCAATCTCC TAGCTGAGTG CTTTTGGAGC TTGGGGAGAA ACGCCGAAGA CGCTTTCATT GAGCTGCTAG AGCAGCTTCT CAAGTTCGTC ACCTGGCAAG AGGCTTTGGC GAGGGCTTGC GGAGAGCTGC TCGAAAGCGA TTGGGCCAAG TCTTATTTGG ATTCGTTATT CGAGGCCGAT CCGTTAAATC TGTGGCCATC GCAACGCCAA GGCATAGCAC AGGCGCTCTA TCTGCTGGAC ACAGTGGGCG CAGTTCTGGT AGCCGACGCG ACTGGCTCTG GGAAGACACG AATGGGCGCT CACCTGATCC GCACCATACA TGATCGTAAT TGGTCACTAG CCAGAGCGCG TAAAAGCTCG ATGCTGCTCA TCTGTCCACC GCTTGTGAGG AAGAATTGGG ATTGGGAAAC AGCGAAATGC GGGTACAACA TTGCCATAAC GTCCCATGGG TTGTTGAGCA GGCTGAACCC GGAAGACGAG TCCAGCTTAG CGATTCACCT GTCCTCAGCC CAAATCTTGG CTGTTGACGA AGCGCACAAC TTCCTCAACC AGGGGTCCAG ACGAACGAGA ACATTGAAAT TTAATCTGGC TGACCAAGTG GTGCTCTTCA CCGCTACGCC GATCAATCGT TCGATAGCAG ATTTGCTTCG ACTCATTGAT ATTCTTGGCG CTGATAATTT TGACGATGAT GTACTTGCTG TCTTCGAGCG TTTGACTGGC TTTGGTCATG GTGGTGCTGA AACTCGCGAC GATGACATAC CGCAGCTTCA AGCTGGAATT GGCAGTTTCG TCGTTCGCCG GACCAAGGCG CAGTTCAATG CGATGGTGGA CTTAGATCCC GAGGCCTATC GGCTTCCAGG CGGGCGGGTA TGCCGGTACC CGAACCAGCT TTCGGAGTGT TATTCCCTAG ACGAGCCGAA TCAGGACAAG AGGTTGGCAA GGGAAATTCG GGCGTTGGCC CTACAATTCA AAGGGATGTC ACGCTTTCAG ACGGCTTTGG CACTACCAGA TTTTTTCAAA GAGAATGGAG TTACACCGGA ACGCTACCTA AGGTTTCGTT TGAAAGCAGC GCGCTCACTA GCCTTGTACC AGGTGATGTC CAGTCTTCGC TCCTCTCGGT TGGCCTTGTA CCGGCACATT GAAGGCGAGG GCGCCGCTTG GAGTCGAATG GGATTAAACA GTGAGAAAAT GAAGGGGGAC CACCAAACCG GCAACATGCT GGAACGGACA GCGATGCTGG CGGGCAAGAT TCCCGAAAAT CATTTAGGAG TCGAGCTACC CCGCTGGCTT TCAGACTCTG CCGAGCATCG TCGAGCTTGT GAAGATGAGT GTCTCCTCTA CACCGCCATT CTTGAGCGCC TAGAGCGTAT GAGCGGTCAT CGGGAGAAAC GGAAGGTGCA GTTTTTGATG GAGCTTCTGG ACCGCCACGA TCATATTCTT GCCTTTGATC ACTACCCGAT AACTCTGCGC TATTTTCAGC ATCTTTTGGA CCAAAAGCGG TCAGATCACC GGCCATTCAG CGTGCTGCTA GGTATCGGGG GTAATCGCCG CAGTCATGAG CATATCCAGT CTTTGCTGAA TCCCAACGCC AAGTCGGAAG GCAAGCTGAT CGTCCTGTGC AGCGAGGCTC TGTCAGAATC GGTCAACCTT CAGCGAGCCT CCACGCTTGT TCACCTGGAT ATGCCGAGCG TGGTGCGTAT CGCCGAGCAG AGAGTAGGGC GGATTGATCG CATGGACTCC TGCCATGCTG AGATCGAATG CTGGTGGCCC AAGGACAGTC GAGAGTTCGC ACTCAGATCA GACGAAACGT TTGTTCAACG CATCTTCCAG GTGGAAAGCT TGATTGGCGG AAATTTACAG CTTCCAGATG ACATCTGCGG AAACCATGAT GCACAGATCG TGACCTGGGA GCATTTTGAC AAACTGGTGC GGGAACGTGC TGCTCGCAAC TGGGATGGAA TTGAAGATGC GTTTGCACCA ATCCGTGGCT TGGCCTCAGG TCCGGAAGCC CTGATCAGCC CTGATGTGTA TGAGCTTTAT CGAAACGAAA CTAACAAGGT CATGTCGCGT GTGAGCGTTG TCCCTTCCAG TGAACCTTGG GTGTTTCTCT GCTTGGCCGG TGAGAATGCG CGCGCACCAA GGTGGATTTT CCTGTCCGGC TCTGATGACC AGCCGGTCAT CAATCTCCGC GAGATTGCAA CGCAGCTGAG GGCACGGTTA TCAGACGATT TGCAGAACCT CAACCCGACA AGGGCTGCAA TGGGCATGCT GCAATCGTTT CTGGCCAGGC TGGGCGAGAT GGAGAAAATG CTACTGCCCA GGCGGAAGCA GCGCGCAATC GCTCAGTTCG AATGGGCGAT AACGCTATGG TCGAGTAGTC CTGGCTGGAT CGGCTCAGAG GAGCAGGCCG AACAGGTTAA GCAACTGCTG GACCTTTTTA GTAGAAAAGG GGAAGAACTG ACCCCTGACT GGGGGCAATT GGCCGGCCTC TGGTTGGAGC TGGTGAAACC CCGGAGTGCG GAGCTTTTAC AGAAGAAAGG AAGGCGGGCA TCGATGACTC GACTACGTGA CTTGGAGCCA TCGCTAAGAT CAGCCCCGAT CGATCTTGAT GTTATTCTGA AGAAAATCCA AGGCGTTGAC CTTCGACGGC GTTGGGAAGA GCGAATCGTT GCTTGTATTC TTGGGTATGG GCAAAGCGCC GAGGAGTGA
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Protein sequence | MPLNLGERTV HSVVDRDLCN EWGSLIVTGY SGLEQLIQLI TGRGVGRTPM RIILGSDPVT VENPKINLGR YDFSEEMREY WLKRGISLAL CGQVLHCIEL IRAGHVRIRY PTGYRRLHAK MYCSAGAVTL GSSNYTGPGL HTQHEANVRF TSGERARFVE TNLLAECFWS LGRNAEDAFI ELLEQLLKFV TWQEALARAC GELLESDWAK SYLDSLFEAD PLNLWPSQRQ GIAQALYLLD TVGAVLVADA TGSGKTRMGA HLIRTIHDRN WSLARARKSS MLLICPPLVR KNWDWETAKC GYNIAITSHG LLSRLNPEDE SSLAIHLSSA QILAVDEAHN FLNQGSRRTR TLKFNLADQV VLFTATPINR SIADLLRLID ILGADNFDDD VLAVFERLTG FGHGGAETRD DDIPQLQAGI GSFVVRRTKA QFNAMVDLDP EAYRLPGGRV CRYPNQLSEC YSLDEPNQDK RLAREIRALA LQFKGMSRFQ TALALPDFFK ENGVTPERYL RFRLKAARSL ALYQVMSSLR SSRLALYRHI EGEGAAWSRM GLNSEKMKGD HQTGNMLERT AMLAGKIPEN HLGVELPRWL SDSAEHRRAC EDECLLYTAI LERLERMSGH REKRKVQFLM ELLDRHDHIL AFDHYPITLR YFQHLLDQKR SDHRPFSVLL GIGGNRRSHE HIQSLLNPNA KSEGKLIVLC SEALSESVNL QRASTLVHLD MPSVVRIAEQ RVGRIDRMDS CHAEIECWWP KDSREFALRS DETFVQRIFQ VESLIGGNLQ LPDDICGNHD AQIVTWEHFD KLVRERAARN WDGIEDAFAP IRGLASGPEA LISPDVYELY RNETNKVMSR VSVVPSSEPW VFLCLAGENA RAPRWIFLSG SDDQPVINLR EIATQLRARL SDDLQNLNPT RAAMGMLQSF LARLGEMEKM LLPRRKQRAI AQFEWAITLW SSSPGWIGSE EQAEQVKQLL DLFSRKGEEL TPDWGQLAGL WLELVKPRSA ELLQKKGRRA SMTRLRDLEP SLRSAPIDLD VILKKIQGVD LRRRWEERIV ACILGYGQSA EE
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