Gene PP_1937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1937 
Symbol 
ID1043123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp2189200 
End bp2192388 
Gene Length3189 bp 
Protein Length1062 aa 
Translation table11 
GC content54% 
IMG OID637145343 
Producthelicase, putative 
Protein accessionNP_744090 
Protein GI26988665 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG0553] Superfamily II DNA/RNA helicases, SNF2 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000134724 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGCCGCTCA ATCTGGGTGA GCGCACCGTT CATTCAGTGG TTGATCGAGA TCTCTGTAAT 
GAATGGGGAT CGTTGATTGT GACCGGCTAC AGCGGTCTAG AGCAGCTTAT TCAGCTCATC
ACTGGCCGTG GGGTAGGGAG GACGCCAATG CGCATCATCC TTGGCTCAGA CCCCGTCACC
GTTGAAAACC CCAAGATCAA TCTCGGGCGC TACGACTTTT CAGAGGAAAT GCGAGAGTAC
TGGCTCAAGC GCGGGATCTC GCTAGCGCTG TGTGGCCAAG TACTACATTG CATCGAGCTG
ATTCGCGCCG GTCACGTGCG AATTCGTTAC CCGACAGGGT ACAGACGGCT ACATGCAAAA
ATGTACTGCT CCGCTGGAGC AGTGACGCTT GGGTCCAGCA ACTACACTGG ACCAGGTTTA
CATACTCAGC ATGAAGCGAA CGTGCGCTTC ACCTCTGGGG AAAGAGCGCG CTTTGTTGAG
ACCAATCTCC TAGCTGAGTG CTTTTGGAGC TTGGGGAGAA ACGCCGAAGA CGCTTTCATT
GAGCTGCTAG AGCAGCTTCT CAAGTTCGTC ACCTGGCAAG AGGCTTTGGC GAGGGCTTGC
GGAGAGCTGC TCGAAAGCGA TTGGGCCAAG TCTTATTTGG ATTCGTTATT CGAGGCCGAT
CCGTTAAATC TGTGGCCATC GCAACGCCAA GGCATAGCAC AGGCGCTCTA TCTGCTGGAC
ACAGTGGGCG CAGTTCTGGT AGCCGACGCG ACTGGCTCTG GGAAGACACG AATGGGCGCT
CACCTGATCC GCACCATACA TGATCGTAAT TGGTCACTAG CCAGAGCGCG TAAAAGCTCG
ATGCTGCTCA TCTGTCCACC GCTTGTGAGG AAGAATTGGG ATTGGGAAAC AGCGAAATGC
GGGTACAACA TTGCCATAAC GTCCCATGGG TTGTTGAGCA GGCTGAACCC GGAAGACGAG
TCCAGCTTAG CGATTCACCT GTCCTCAGCC CAAATCTTGG CTGTTGACGA AGCGCACAAC
TTCCTCAACC AGGGGTCCAG ACGAACGAGA ACATTGAAAT TTAATCTGGC TGACCAAGTG
GTGCTCTTCA CCGCTACGCC GATCAATCGT TCGATAGCAG ATTTGCTTCG ACTCATTGAT
ATTCTTGGCG CTGATAATTT TGACGATGAT GTACTTGCTG TCTTCGAGCG TTTGACTGGC
TTTGGTCATG GTGGTGCTGA AACTCGCGAC GATGACATAC CGCAGCTTCA AGCTGGAATT
GGCAGTTTCG TCGTTCGCCG GACCAAGGCG CAGTTCAATG CGATGGTGGA CTTAGATCCC
GAGGCCTATC GGCTTCCAGG CGGGCGGGTA TGCCGGTACC CGAACCAGCT TTCGGAGTGT
TATTCCCTAG ACGAGCCGAA TCAGGACAAG AGGTTGGCAA GGGAAATTCG GGCGTTGGCC
CTACAATTCA AAGGGATGTC ACGCTTTCAG ACGGCTTTGG CACTACCAGA TTTTTTCAAA
GAGAATGGAG TTACACCGGA ACGCTACCTA AGGTTTCGTT TGAAAGCAGC GCGCTCACTA
GCCTTGTACC AGGTGATGTC CAGTCTTCGC TCCTCTCGGT TGGCCTTGTA CCGGCACATT
GAAGGCGAGG GCGCCGCTTG GAGTCGAATG GGATTAAACA GTGAGAAAAT GAAGGGGGAC
CACCAAACCG GCAACATGCT GGAACGGACA GCGATGCTGG CGGGCAAGAT TCCCGAAAAT
CATTTAGGAG TCGAGCTACC CCGCTGGCTT TCAGACTCTG CCGAGCATCG TCGAGCTTGT
GAAGATGAGT GTCTCCTCTA CACCGCCATT CTTGAGCGCC TAGAGCGTAT GAGCGGTCAT
CGGGAGAAAC GGAAGGTGCA GTTTTTGATG GAGCTTCTGG ACCGCCACGA TCATATTCTT
GCCTTTGATC ACTACCCGAT AACTCTGCGC TATTTTCAGC ATCTTTTGGA CCAAAAGCGG
TCAGATCACC GGCCATTCAG CGTGCTGCTA GGTATCGGGG GTAATCGCCG CAGTCATGAG
CATATCCAGT CTTTGCTGAA TCCCAACGCC AAGTCGGAAG GCAAGCTGAT CGTCCTGTGC
AGCGAGGCTC TGTCAGAATC GGTCAACCTT CAGCGAGCCT CCACGCTTGT TCACCTGGAT
ATGCCGAGCG TGGTGCGTAT CGCCGAGCAG AGAGTAGGGC GGATTGATCG CATGGACTCC
TGCCATGCTG AGATCGAATG CTGGTGGCCC AAGGACAGTC GAGAGTTCGC ACTCAGATCA
GACGAAACGT TTGTTCAACG CATCTTCCAG GTGGAAAGCT TGATTGGCGG AAATTTACAG
CTTCCAGATG ACATCTGCGG AAACCATGAT GCACAGATCG TGACCTGGGA GCATTTTGAC
AAACTGGTGC GGGAACGTGC TGCTCGCAAC TGGGATGGAA TTGAAGATGC GTTTGCACCA
ATCCGTGGCT TGGCCTCAGG TCCGGAAGCC CTGATCAGCC CTGATGTGTA TGAGCTTTAT
CGAAACGAAA CTAACAAGGT CATGTCGCGT GTGAGCGTTG TCCCTTCCAG TGAACCTTGG
GTGTTTCTCT GCTTGGCCGG TGAGAATGCG CGCGCACCAA GGTGGATTTT CCTGTCCGGC
TCTGATGACC AGCCGGTCAT CAATCTCCGC GAGATTGCAA CGCAGCTGAG GGCACGGTTA
TCAGACGATT TGCAGAACCT CAACCCGACA AGGGCTGCAA TGGGCATGCT GCAATCGTTT
CTGGCCAGGC TGGGCGAGAT GGAGAAAATG CTACTGCCCA GGCGGAAGCA GCGCGCAATC
GCTCAGTTCG AATGGGCGAT AACGCTATGG TCGAGTAGTC CTGGCTGGAT CGGCTCAGAG
GAGCAGGCCG AACAGGTTAA GCAACTGCTG GACCTTTTTA GTAGAAAAGG GGAAGAACTG
ACCCCTGACT GGGGGCAATT GGCCGGCCTC TGGTTGGAGC TGGTGAAACC CCGGAGTGCG
GAGCTTTTAC AGAAGAAAGG AAGGCGGGCA TCGATGACTC GACTACGTGA CTTGGAGCCA
TCGCTAAGAT CAGCCCCGAT CGATCTTGAT GTTATTCTGA AGAAAATCCA AGGCGTTGAC
CTTCGACGGC GTTGGGAAGA GCGAATCGTT GCTTGTATTC TTGGGTATGG GCAAAGCGCC
GAGGAGTGA
 
Protein sequence
MPLNLGERTV HSVVDRDLCN EWGSLIVTGY SGLEQLIQLI TGRGVGRTPM RIILGSDPVT 
VENPKINLGR YDFSEEMREY WLKRGISLAL CGQVLHCIEL IRAGHVRIRY PTGYRRLHAK
MYCSAGAVTL GSSNYTGPGL HTQHEANVRF TSGERARFVE TNLLAECFWS LGRNAEDAFI
ELLEQLLKFV TWQEALARAC GELLESDWAK SYLDSLFEAD PLNLWPSQRQ GIAQALYLLD
TVGAVLVADA TGSGKTRMGA HLIRTIHDRN WSLARARKSS MLLICPPLVR KNWDWETAKC
GYNIAITSHG LLSRLNPEDE SSLAIHLSSA QILAVDEAHN FLNQGSRRTR TLKFNLADQV
VLFTATPINR SIADLLRLID ILGADNFDDD VLAVFERLTG FGHGGAETRD DDIPQLQAGI
GSFVVRRTKA QFNAMVDLDP EAYRLPGGRV CRYPNQLSEC YSLDEPNQDK RLAREIRALA
LQFKGMSRFQ TALALPDFFK ENGVTPERYL RFRLKAARSL ALYQVMSSLR SSRLALYRHI
EGEGAAWSRM GLNSEKMKGD HQTGNMLERT AMLAGKIPEN HLGVELPRWL SDSAEHRRAC
EDECLLYTAI LERLERMSGH REKRKVQFLM ELLDRHDHIL AFDHYPITLR YFQHLLDQKR
SDHRPFSVLL GIGGNRRSHE HIQSLLNPNA KSEGKLIVLC SEALSESVNL QRASTLVHLD
MPSVVRIAEQ RVGRIDRMDS CHAEIECWWP KDSREFALRS DETFVQRIFQ VESLIGGNLQ
LPDDICGNHD AQIVTWEHFD KLVRERAARN WDGIEDAFAP IRGLASGPEA LISPDVYELY
RNETNKVMSR VSVVPSSEPW VFLCLAGENA RAPRWIFLSG SDDQPVINLR EIATQLRARL
SDDLQNLNPT RAAMGMLQSF LARLGEMEKM LLPRRKQRAI AQFEWAITLW SSSPGWIGSE
EQAEQVKQLL DLFSRKGEEL TPDWGQLAGL WLELVKPRSA ELLQKKGRRA SMTRLRDLEP
SLRSAPIDLD VILKKIQGVD LRRRWEERIV ACILGYGQSA EE