| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1936 |
|---|
| Symbol | |
|---|
| ID | 1043124 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 2184669 |
|---|
| End bp | 2187605 |
|---|
| Gene Length | 2937 bp |
|---|
| Protein Length | 978 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637145342 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_744089 |
|---|
| Protein GI | 26988664 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4928] Predicted P-loop ATPase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.00000106944 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGGGCAAGA TGAAGCCTGA AATGAAGATC CCAGAGTTTA TGGTATTTCT GAGAATACTA
TCGACAGGAT TTTTATTAGC AGAAGTCTGG AGAATAGCTT CTTATTTAGG ATCAAATTAC
GCACCTATAA TTCTAAAAGA AAACATCTGG GTTCAAGCCC TAACCCTTTC AATGCCATTG
ATTTTATGCA TTAATTATTC TCTCAAGCGG GGAGCAACCG AAGACACTGT CCGCATAATC
AAAAGCTGTA GAATAGATCT TCTCGCTGCA TTAATTTTCG GTATCTGGGC AAATTCGCTC
CTAGCACCGA GACTAAAATC GCTCCATGAG GTGTTTGAGG CAGCGGATCC GTACTGGGCC
CCTGCAATCT TGACTATTCT ATGCGCTATT ATACTTTCAC CGACAGTACA ACACCTACGC
GCCCTATTCA AGAAAGAAAC ATCTCAACTC TACTTTCTTT CAGATGATGA AATACATAAA
AGCACGGAAG ACGCACTACA CTGTGATCCT CAGGCAGAAT CATTTGCCAA AACCATAATG
GCTAGCCACG CTCACCCAGG CTTGGTCTTT GGCATCGACG GCCCCTGGGG AGTTGGGAAA
ACCAGCTTCA TCAACCTAGC AGCGCGTTAT TGGGAAAAAC ATTCCAACGA AATAATTATT
TGTCGTTTTG AACCACTCCG ATTTGCGTCC GAGCCAGATC TTACAGATAG GCTTATCAAA
GAGCTATCCG CAACTATCCA GCGGGAAGCC TATGCTCCTG AGTTTCGACC AGCAGCTTCG
AGATATTCGC GACTAATCAA AGGCAAAGCA GATATTTCCT TCTTAGGATT CAAGTTAGCC
ATTGAACCCT CACAAGAAAC CCTAGATGAA CTTTTGGACG ACATTGATGA TGTACTTCGA
CGAATAGGTC GCCGCGTTAT TATAGTTATA GATGATCTTG ACCGCCTAGA TTCAAAAACT
GCCAACTCAG TATTATTTGC AACTCGCAGG ACATTCAAAC TATCTCAAGC CACGTTCATA
CTGTGCTACG ACACTGAAAT TCTAGCCGGA ATTCAAGAAG AAACTTCCCG CGCACGTGAG
TTTCTAGAAA AATTCGTCAC TGTGAAGCTA AGCTTATTTG TTGACAGTTC TTCAATACAG
AATTTTCTGA CAAGAGACTG GCAGAATGAA GAGCAGAAGC TTACATCGGT CCCCTCTGAC
ACGATGATAC AGCTTGGCGC AGTGCTTACC GAGCTTTCTA ATATTCTCGA AGGCGACAAC
GCAGCTAGCT ATTTACCTTA CGTGAGAAAT CTTCGGAAGG TCAAGCGCTT CGTAAATGCT
CTTCTTATTT TACAGATGGA GCGAAGCGAT CTCTCACGCA CAGACTTCAA CAAAATTGAC
CTCATTAATT TAATATTGAT TCACTTATTC TACCCAGGTA CCTTCAGGCA AATTTATGCA
GAAGAAACAG AGGGGAGATC TGGGCGCTTC TCACTAAAGA GAAATTTAGA GGCTGATAAC
TTCATAAATA CACCGGAGTT TTCCAAGCAA TTAGAAAACG AACCAGCTCA AGCGTTCCTG
CTACGTCAAC TCTTCGACGT AGAAACTCTA GAGCTTCCGA CCCGCTCAGA CATAGAGCCA
TCAGTACGGG CTAGTCGTGC ATGTTTCAAC CACGAAGGAT CTCGAAATCT AGAGAGTTAC
CTAAAACTGA TTGTTAGATT TGCCACCCCG GAGCCTCAGG ATACCTTCGC GCTGTACCAA
GAAGCTGTTA ACTCAGTGAT GAATGGTGAA AAAATCGCTA CCATTTTAAC ATCAAAAAAC
TTCAATCTTA TCAAGCATGA GCGGGCTCAT GATCAATTTT GGAGGCTGCT CGTCAACAGC
TCTTCCAGCT TCAACCATAT TGCCGCTGAA GATGCTATCA ACACCTTGAT TGAATACCTC
CCCCGATATG CATCTATCGG ACGATTCGAT GGCAGCCTGC GACACAGGTC TATCTACGCA
CTATTGAGAC TTTTGGATCG CGCTGGATGG GGTAGGACAG CTGGTAAGCG CCTCGTAAAC
TCTAATGAAA ATGTGGTCGA GATAGCGCAA CGAATTTTTG GCGAGGGCGA ATACAGAAAC
AAAGGGATTC TTGACCGGAT TACCAGCGAT GACCGAGGTG CGCTGGGTTG GAATGATCTA
ATGCTTCTAC GACTCCAATG TTCGGCTGAT CGTAAAGGAC AACTTTACAA TCTTCAAAAG
GCGCTCATTG TGGTCGATCA CCCGAATGCA GCAACCTCAG GAGTTATAAG CAGACTGGCA
ATTATGGGCA TGAGAAGAAT CTCCCAACTA GTCTTTGCCA AATTCAAAGC CGAGCACATT
GACAAAAAAA TCAACTTTTA TGACACTGTA GACGCGATTC CTGACGAAAA CTTTGACACT
ACTGGACTCT TACTTACTCA TGAAAGCGAC CCTGACGCTA AAAACTTAAT TACCAGCAAC
ATACTTGCCA GCCGCTCAGG AGTCAAAAGC TTTGTAATAT ACCAGCTCTG CAATAGTAAA
GGGGCGAATG GATCTGGTGT CGGCTGTGGT TACTACGATG AATCAGGCAA TGAAGACAAA
CACGGCATAT CCATATTGGT TGAAAGCTAC GTTTTCGATT TTTGCTTCAA TCCTAACGTT
GATAAAAATA ACGCCTATCA CTTCCTCGAC TACTGCCTCT CCAACCTCAG TAACTCTTAT
TTCGAAGACA TTCCAGGTGG TGGCTTCGTA GCCGCCAGAA GCGGTTTGGT AGGATGCTTC
ACACTTGAGA GCTTTTCTTT ATATTGGAGA GAGCACGGTG ATGCAGTCCG CGCAAAAGCT
AAAGAAATGC CCGATCGGAA GGTGGTAACG TCGAACTATG TCGCTTCCTA TGCCGAGGAC
CTAGATGGGG TATTTAAAGT CCTTGACGAG ATTACTGAGG GGATAAATTT AACGTAG
|
|---|
| Protein sequence | MGKMKPEMKI PEFMVFLRIL STGFLLAEVW RIASYLGSNY APIILKENIW VQALTLSMPL
ILCINYSLKR GATEDTVRII KSCRIDLLAA LIFGIWANSL LAPRLKSLHE VFEAADPYWA
PAILTILCAI ILSPTVQHLR ALFKKETSQL YFLSDDEIHK STEDALHCDP QAESFAKTIM
ASHAHPGLVF GIDGPWGVGK TSFINLAARY WEKHSNEIII CRFEPLRFAS EPDLTDRLIK
ELSATIQREA YAPEFRPAAS RYSRLIKGKA DISFLGFKLA IEPSQETLDE LLDDIDDVLR
RIGRRVIIVI DDLDRLDSKT ANSVLFATRR TFKLSQATFI LCYDTEILAG IQEETSRARE
FLEKFVTVKL SLFVDSSSIQ NFLTRDWQNE EQKLTSVPSD TMIQLGAVLT ELSNILEGDN
AASYLPYVRN LRKVKRFVNA LLILQMERSD LSRTDFNKID LINLILIHLF YPGTFRQIYA
EETEGRSGRF SLKRNLEADN FINTPEFSKQ LENEPAQAFL LRQLFDVETL ELPTRSDIEP
SVRASRACFN HEGSRNLESY LKLIVRFATP EPQDTFALYQ EAVNSVMNGE KIATILTSKN
FNLIKHERAH DQFWRLLVNS SSSFNHIAAE DAINTLIEYL PRYASIGRFD GSLRHRSIYA
LLRLLDRAGW GRTAGKRLVN SNENVVEIAQ RIFGEGEYRN KGILDRITSD DRGALGWNDL
MLLRLQCSAD RKGQLYNLQK ALIVVDHPNA ATSGVISRLA IMGMRRISQL VFAKFKAEHI
DKKINFYDTV DAIPDENFDT TGLLLTHESD PDAKNLITSN ILASRSGVKS FVIYQLCNSK
GANGSGVGCG YYDESGNEDK HGISILVESY VFDFCFNPNV DKNNAYHFLD YCLSNLSNSY
FEDIPGGGFV AARSGLVGCF TLESFSLYWR EHGDAVRAKA KEMPDRKVVT SNYVASYAED
LDGVFKVLDE ITEGINLT
|
|---|
| |