Gene PP_1929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1929 
SymbolarsB-1 
ID1043133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp2175256 
End bp2176539 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content63% 
IMG OID637145335 
Productarsenite efflux transporter 
Protein accessionNP_744082 
Protein GI26988657 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1055] Na+/H+ antiporter NhaD and related arsenite permeases 
TIGRFAM ID[TIGR00935] arsenical pump membrane protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.110099 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000040176 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGCTGATCG CATTTTTGAT TTTCCTGGTG ACGATCGTTC TCGTCATCTG GCAGCCCAAA 
GGCCTGGGTG TGGGCTGGAG TGCCGCACTG GGGGCCGTCG TGGCGCTGCT GGCGGGCGTC
GTGAGCTTGT CCGATATCCC CGTGGTCTGG CAGATCGTCT GGAACGCTAC CGCCACCTTC
ATCGCCGTCA TCATCATCAG CCTGCTGCTG GATGAGGCGG GCTTCTTCGA GTGGGCGGCA
TTGCACGTGG CGCGCTGGGG CAAGGGCAGC AGCCGCAAGC TGTTTGCCTT CATCATCCTG
CTGGGCGCCG CCGTCTCGGC GTTGTTCGCC AACGACGGTG CGGCACTGAT CCTGACTCCG
ATCGTCATCG CCATGCTGCT GGCCCTGCGC TTTTCCCCGG CGGCGACGCT GGCATTCGTC
ATGGCAGCAG GCTTTATCGC CGATACCGCG AGCCTGCCGC TGGTGGTGTC CAACCTGGTG
AACATCGTCT CCGCCGACTA CTTCGGCATC GGTTTCAGCG AGTACGCCTC GGTCATGGTG
CCGGTGAACC TGGTCAGCAT CGCCGCCACC CTGGGCATGC TGCTGTGGTT CTTCCGCAAG
GACCTGCCGC GTACCTATGA ACTCGACCAA CTGAAGGCTC CCGAGGCCGC TATCCGCGAC
AAAGCGACGT TCGTTGCCGG CTGGTGGGTG CTTGCGCTGT TGCTGGTCGG CTTCTTCGCC
ATCGAGCCGC TGGGTGTTCC GATCAGCGCC ATCGCTGCTG CCTGCGCGCT GATCCTCTAC
CTGATCGCCG CTCGCGGGCA TGTGATTTCT ACCCGCAAGG TGCTCAAGGA CGCGCCTTGG
CAGGTCGTGG TGTTCTCGCT TGGCATGTAT CTCGTGGTCT ATGGTCTGCG TAACGCCGGC
CTCACCGAAT ACCTGACGCA GATCCTCAAT GTTTTCGCCG GCTACGGGAT CTGGGGCGCA
TCCCTCGGGA CGGGGCTGCT CGCTGCTGGC CTGTCGTCGG CCATGAACAA CATGCCCACT
GTGCTGGTAG GGGCCTTGTC GATCCAATCC GCCGAGGCCA CCGGCATCGT GCGCGAGGCC
ATGGTCTACG CCAACGTCAT CGGTTGTGAC CTCGGTCCGA AAATCACCCC AATCGGCAGC
CTGGCCACTT TGCTGTGGCT GCACGTGCTG GCCCGCAAGA ACATCGTCAT CACCTGGGGC
TACTACTTCC GTACCGGCAT CGTCCTAACG CTGCCGATCC TGCTTGCCAC CTTGGCCGCA
TTGGCCATCC GCCTGAGCTT TTGA
 
Protein sequence
MLIAFLIFLV TIVLVIWQPK GLGVGWSAAL GAVVALLAGV VSLSDIPVVW QIVWNATATF 
IAVIIISLLL DEAGFFEWAA LHVARWGKGS SRKLFAFIIL LGAAVSALFA NDGAALILTP
IVIAMLLALR FSPAATLAFV MAAGFIADTA SLPLVVSNLV NIVSADYFGI GFSEYASVMV
PVNLVSIAAT LGMLLWFFRK DLPRTYELDQ LKAPEAAIRD KATFVAGWWV LALLLVGFFA
IEPLGVPISA IAAACALILY LIAARGHVIS TRKVLKDAPW QVVVFSLGMY LVVYGLRNAG
LTEYLTQILN VFAGYGIWGA SLGTGLLAAG LSSAMNNMPT VLVGALSIQS AEATGIVREA
MVYANVIGCD LGPKITPIGS LATLLWLHVL ARKNIVITWG YYFRTGIVLT LPILLATLAA
LAIRLSF