| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1923 |
|---|
| Symbol | |
|---|
| ID | 1043144 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 2169737 |
|---|
| End bp | 2170738 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637145329 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_744076 |
|---|
| Protein GI | 26988651 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.000000458124 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGCTT TCGGAAAGAC GTGTTGGTTG AGCGTGAATT TGTGGGGGTT GCCTGGCTGG
GTCGGCTCGT ATTTCACATC CATGTCCTAT TCACTAAACC GCTTGTGGGT GAACATCGTT
ACTATCGGCG TCATACGGAT CAAAGCGCGT TATGGCTGGT ATGGCATTTC GTGTCCGGCA
CCAACGCACG CTATGAACGC AGCCGGAGGA AGAATGAAGG AAGACGGGAA GGCTGTCAGT
TTACTGAAAA AAGGTTGCGG CATCGCAGGT GCTAGTGTCG GCTCTGTCGT ATCCGCGCTC
ATTGAAGGTG CCGTGGTCGG GCCGGCAGGT ACAGCGGCGG GAGCAGCCAT AGCTAAAGCT
TGCGAATTCG TCATCGAGGA CATTGCTCAC CGGATGCTTT CCAGCCGTGA GCAACAAAAG
GTCGGCGGTG TTGCAGCGCT GGCCATCGAC GGCATACGCG AGCGGCTTCT CTGGGACAGC
CCTCGCAAGG ACGGCTTCTT CAAGAGAAAG GAAGACGACC AACCCTCTCC AGGTGAGGAA
ATCTTCGAAG GCGTGCTGCT TGCCGCAAAG CAGGAGCACG AGAGGAAAAA ACTGGAGTAC
ATCGCCCGCT TCTTCACCAA CCTCGTCTTC AAGACCGACT TCCAGCCCGC TGAGGCCAAT
CACCTGCTCG CGATCGCCGA GACTCTTACC TACCAGCAAT TCTGCATCTT AGCCGTGGTC
GCGAATCGCG ATGCGTTTGC TCTAAGGTCT GAAGAATGGC CTGAACGGGG CGTGATTCCC
ACGGACAAGC TTGACCTGGC CCATCAGGCA TTCTACCTCT ACCAAAGGCA ATTTCTCGTC
AGCATAGACC CGCAGCAGGG CCAAGCAGGC TTCGTATATA ACATAGCTCG CACCCTACCC
ATTCACTGTC ACCTTTCGCC TACCGGTCTG AGGATCGTGG ACATCCTGGG TCTGCGGGAC
ATCCCGCGTG TGGAGCTGGA TGAGGTGGCG GGTGACCTGT AA
|
|---|
| Protein sequence | MLAFGKTCWL SVNLWGLPGW VGSYFTSMSY SLNRLWVNIV TIGVIRIKAR YGWYGISCPA
PTHAMNAAGG RMKEDGKAVS LLKKGCGIAG ASVGSVVSAL IEGAVVGPAG TAAGAAIAKA
CEFVIEDIAH RMLSSREQQK VGGVAALAID GIRERLLWDS PRKDGFFKRK EDDQPSPGEE
IFEGVLLAAK QEHERKKLEY IARFFTNLVF KTDFQPAEAN HLLAIAETLT YQQFCILAVV
ANRDAFALRS EEWPERGVIP TDKLDLAHQA FYLYQRQFLV SIDPQQGQAG FVYNIARTLP
IHCHLSPTGL RIVDILGLRD IPRVELDEVA GDL
|
|---|
| |