Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1916 |
Symbol | fabF |
ID | 1043161 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 2159016 |
End bp | 2160260 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637145323 |
Product | 3-oxoacyl-(acyl carrier protein) synthase II |
Protein accession | NP_744070 |
Protein GI | 26988645 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
TIGRFAM ID | [TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.136863 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.000000296271 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | GTGTCGCGTA GACGCGTCGT GGTCACCGGT ATGGGTATGC TGTCGCCACT GGGTACCGAT GTACCGAGCA CCTGGCAGGG CATTCTGGCT GGCCGCAGTG GCATCGGTCC GATCGAACAC ACGGACCTGT CTGCCTACTC CACCCGTTTT GGCGGCTCGG TGAAAGGCTT CGAGGTTGAG CAGTACCTGT CGGCCAAAGA GGCCCGCAAG CTCGACCTGT TCATCCAGTA CGGCCTGGCG GCTGGTTTCC AGGCCGTGCG TAATGCCGGC CTGGAGGTCA CCGATGCCAA CCGCGAGCGT ATTGGCGTGG CCATGGGCTC GGGTATCGGT GGTTTGACCA ACATCGAAGA AACCAGCCGC ACCCTGCACG ATTCAGGGCC GCGCCGCATT TCGCCGTTCT TCGTGCCGGG TTCGATCATC AACATGATCT CCGGTTTCCT GTCGATCCAC CTGGGTCTGC AAGGGCCGAA CTATGCCATC GCCACTGCGT GCACCACTGG CACCCATTGC ATCGGCATGG CCGCGCGCAA TATCGCCTAC GGTGAGGCTG ACGTGATGAT CGCCGGTGGC GCCGAAATGG CCGCTTGTGG TCTGGGCATG GGCGGTTTTG GCGCTTCGCG CGCACTGTCT ACCCGCAACG ATGAACCCAG CCGGGCCAGC CGCCCGTGGG ACAAGGGTCG TGACGGCTTT GTATTGTCCG ACGGTGCCGG AGCCCTGGTG CTCGAGGAGC TGGAGCACGC CAAGGCCCGC GGTGCGACTA TCTATGCCGA GCTGGTTGGC TTTGGCATGA GCGGCGACGC CTACCACATG ACCTCGCCAC CCGACTCTGG CGAGGGCGCT GCCCGCTGCA TGGCCAACGC CTTGCGCGAT GCCGGTATCC AGCCGGAAGA AGTCAGCTAC ATCAACGCCC ACGGCACTTC TACCCCGGCG GGCGATGTGG CCGAAGTGGC GGCGATCAAG CGCGTGTTCG GCGAGCATGC CTACAAGCTG GCGGTCAGCT CGACCAAGTC GATGACCGGT CACTTGCTGG GCGCCGCGGG CGCGGTGGAG GCGATCTTCA GCGTGCTGGC CATCAATAGC CAGATGGCCC CGCCGACCAT CAACCTGGAC GAGCCGGACG AGGGGTGTGA CCTCGACTTC GTTCCCCACC AGGCGCGCAG CATGCCGATC GACGTGGTGC TGTCCAACTC GTTCGGCTTT GGCGGCACCA ACGGCTCGCT GGTATTCCGC CGGTTTGCCG GCTGA
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Protein sequence | MSRRRVVVTG MGMLSPLGTD VPSTWQGILA GRSGIGPIEH TDLSAYSTRF GGSVKGFEVE QYLSAKEARK LDLFIQYGLA AGFQAVRNAG LEVTDANRER IGVAMGSGIG GLTNIEETSR TLHDSGPRRI SPFFVPGSII NMISGFLSIH LGLQGPNYAI ATACTTGTHC IGMAARNIAY GEADVMIAGG AEMAACGLGM GGFGASRALS TRNDEPSRAS RPWDKGRDGF VLSDGAGALV LEELEHAKAR GATIYAELVG FGMSGDAYHM TSPPDSGEGA ARCMANALRD AGIQPEEVSY INAHGTSTPA GDVAEVAAIK RVFGEHAYKL AVSSTKSMTG HLLGAAGAVE AIFSVLAINS QMAPPTINLD EPDEGCDLDF VPHQARSMPI DVVLSNSFGF GGTNGSLVFR RFAG
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