Gene PP_1916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1916 
SymbolfabF 
ID1043161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp2159016 
End bp2160260 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content64% 
IMG OID637145323 
Product3-oxoacyl-(acyl carrier protein) synthase II 
Protein accessionNP_744070 
Protein GI26988645 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID[TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.136863 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000296271 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
GTGTCGCGTA GACGCGTCGT GGTCACCGGT ATGGGTATGC TGTCGCCACT GGGTACCGAT 
GTACCGAGCA CCTGGCAGGG CATTCTGGCT GGCCGCAGTG GCATCGGTCC GATCGAACAC
ACGGACCTGT CTGCCTACTC CACCCGTTTT GGCGGCTCGG TGAAAGGCTT CGAGGTTGAG
CAGTACCTGT CGGCCAAAGA GGCCCGCAAG CTCGACCTGT TCATCCAGTA CGGCCTGGCG
GCTGGTTTCC AGGCCGTGCG TAATGCCGGC CTGGAGGTCA CCGATGCCAA CCGCGAGCGT
ATTGGCGTGG CCATGGGCTC GGGTATCGGT GGTTTGACCA ACATCGAAGA AACCAGCCGC
ACCCTGCACG ATTCAGGGCC GCGCCGCATT TCGCCGTTCT TCGTGCCGGG TTCGATCATC
AACATGATCT CCGGTTTCCT GTCGATCCAC CTGGGTCTGC AAGGGCCGAA CTATGCCATC
GCCACTGCGT GCACCACTGG CACCCATTGC ATCGGCATGG CCGCGCGCAA TATCGCCTAC
GGTGAGGCTG ACGTGATGAT CGCCGGTGGC GCCGAAATGG CCGCTTGTGG TCTGGGCATG
GGCGGTTTTG GCGCTTCGCG CGCACTGTCT ACCCGCAACG ATGAACCCAG CCGGGCCAGC
CGCCCGTGGG ACAAGGGTCG TGACGGCTTT GTATTGTCCG ACGGTGCCGG AGCCCTGGTG
CTCGAGGAGC TGGAGCACGC CAAGGCCCGC GGTGCGACTA TCTATGCCGA GCTGGTTGGC
TTTGGCATGA GCGGCGACGC CTACCACATG ACCTCGCCAC CCGACTCTGG CGAGGGCGCT
GCCCGCTGCA TGGCCAACGC CTTGCGCGAT GCCGGTATCC AGCCGGAAGA AGTCAGCTAC
ATCAACGCCC ACGGCACTTC TACCCCGGCG GGCGATGTGG CCGAAGTGGC GGCGATCAAG
CGCGTGTTCG GCGAGCATGC CTACAAGCTG GCGGTCAGCT CGACCAAGTC GATGACCGGT
CACTTGCTGG GCGCCGCGGG CGCGGTGGAG GCGATCTTCA GCGTGCTGGC CATCAATAGC
CAGATGGCCC CGCCGACCAT CAACCTGGAC GAGCCGGACG AGGGGTGTGA CCTCGACTTC
GTTCCCCACC AGGCGCGCAG CATGCCGATC GACGTGGTGC TGTCCAACTC GTTCGGCTTT
GGCGGCACCA ACGGCTCGCT GGTATTCCGC CGGTTTGCCG GCTGA
 
Protein sequence
MSRRRVVVTG MGMLSPLGTD VPSTWQGILA GRSGIGPIEH TDLSAYSTRF GGSVKGFEVE 
QYLSAKEARK LDLFIQYGLA AGFQAVRNAG LEVTDANRER IGVAMGSGIG GLTNIEETSR
TLHDSGPRRI SPFFVPGSII NMISGFLSIH LGLQGPNYAI ATACTTGTHC IGMAARNIAY
GEADVMIAGG AEMAACGLGM GGFGASRALS TRNDEPSRAS RPWDKGRDGF VLSDGAGALV
LEELEHAKAR GATIYAELVG FGMSGDAYHM TSPPDSGEGA ARCMANALRD AGIQPEEVSY
INAHGTSTPA GDVAEVAAIK RVFGEHAYKL AVSSTKSMTG HLLGAAGAVE AIFSVLAINS
QMAPPTINLD EPDEGCDLDF VPHQARSMPI DVVLSNSFGF GGTNGSLVFR RFAG