Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1913 |
Symbol | fabD |
ID | 1043164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 2156694 |
End bp | 2157632 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637145320 |
Product | malonyl CoA-acyl carrier protein transacylase |
Protein accession | NP_744067 |
Protein GI | 26988642 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0331] (acyl-carrier-protein) S-malonyltransferase |
TIGRFAM ID | [TIGR00128] malonyl CoA-acyl carrier protein transacylase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.000000227401 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGTCTGCAT CCCTCGCATT CGTCTTTCCC GGTCAAGGTT CCCAGTCGCT GGGCATGCTC GCCGAGCTCG GCGCCGAGAA GCCAGTGATC ATCGAAACCT TCAAGGAAGC GTCCGAAGCG CTCGGCTACG ACCTGTGGAA GCTGGTCCAG GACGGCCCGG AAGAGCAACT TAACCAGACC GACAAGACCC AGCCGGCGAT CCTTACTGCG TCCATCGCAC TGTGGCGCCT GTGGCTGGAA GAGGGCGGTG CCAAGCCGGC CTTCGTTTCC GGTCACAGCC TGGGCGAATA CAGCGCCCTG GTCGCCGCCG GCAGCATCAG CCTGAAAGAT GCCGTTCGCC TGGTCGAGCG CCGCGGTCAG CTGATGCAGG AAGCCGTACC GGCCGGTCAC GGCGCCATGG CTGCCATTCT CGGCCTGGAC GATGCTGTGG TCGTGGAACT CTGCGCCGAA GCCGCTGAAG ATGAAGTGGT CAGCGCCGTG AACTTCAACT CGCCTGGTCA GGTGGTCATC GCCGGTAACA AGGCGGCGGT AGACCGCGCC ATGGAGCTGT GCAAGGCCAA AGGTGCCAAG CGCGCCCTGC CACTGGCGGT GAGCGTCCCG TCGCACTGCG CCCTGATGAA GCCAGCCGCC GAGCGCTTTG CCGAATCGGT CAATGCCATC GAATGGAAGG CCCCGCAGAT TCCGGTGGTG CAGAACGTCA CTGCAGCCGT CGCCGCCGAC CTCGATGCCC TCAAGCACGA CCTGCTGGCA CAGCTGTACC AGCCGGTACG CTGGGTCGAG TGCGTGCAGA CCCTGGCCGC CAACGGTGCG GTCAACCTGG TCGAGTGTGG CCCGGGCAAG GTGCTGGCTG GCCTTAACAA GCGTTGCGCC GACGGCGTGA CCACCTACAA CCTCAACACC CCTGACGCCG TTGCTGCCAC CCGCGCGGCA CTGGCCTGA
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Protein sequence | MSASLAFVFP GQGSQSLGML AELGAEKPVI IETFKEASEA LGYDLWKLVQ DGPEEQLNQT DKTQPAILTA SIALWRLWLE EGGAKPAFVS GHSLGEYSAL VAAGSISLKD AVRLVERRGQ LMQEAVPAGH GAMAAILGLD DAVVVELCAE AAEDEVVSAV NFNSPGQVVI AGNKAAVDRA MELCKAKGAK RALPLAVSVP SHCALMKPAA ERFAESVNAI EWKAPQIPVV QNVTAAVAAD LDALKHDLLA QLYQPVRWVE CVQTLAANGA VNLVECGPGK VLAGLNKRCA DGVTTYNLNT PDAVAATRAA LA
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