Gene PP_1913 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1913 
SymbolfabD 
ID1043164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp2156694 
End bp2157632 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content65% 
IMG OID637145320 
Productmalonyl CoA-acyl carrier protein transacylase 
Protein accessionNP_744067 
Protein GI26988642 
COG category[I] Lipid transport and metabolism 
COG ID[COG0331] (acyl-carrier-protein) S-malonyltransferase 
TIGRFAM ID[TIGR00128] malonyl CoA-acyl carrier protein transacylase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000227401 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGTCTGCAT CCCTCGCATT CGTCTTTCCC GGTCAAGGTT CCCAGTCGCT GGGCATGCTC 
GCCGAGCTCG GCGCCGAGAA GCCAGTGATC ATCGAAACCT TCAAGGAAGC GTCCGAAGCG
CTCGGCTACG ACCTGTGGAA GCTGGTCCAG GACGGCCCGG AAGAGCAACT TAACCAGACC
GACAAGACCC AGCCGGCGAT CCTTACTGCG TCCATCGCAC TGTGGCGCCT GTGGCTGGAA
GAGGGCGGTG CCAAGCCGGC CTTCGTTTCC GGTCACAGCC TGGGCGAATA CAGCGCCCTG
GTCGCCGCCG GCAGCATCAG CCTGAAAGAT GCCGTTCGCC TGGTCGAGCG CCGCGGTCAG
CTGATGCAGG AAGCCGTACC GGCCGGTCAC GGCGCCATGG CTGCCATTCT CGGCCTGGAC
GATGCTGTGG TCGTGGAACT CTGCGCCGAA GCCGCTGAAG ATGAAGTGGT CAGCGCCGTG
AACTTCAACT CGCCTGGTCA GGTGGTCATC GCCGGTAACA AGGCGGCGGT AGACCGCGCC
ATGGAGCTGT GCAAGGCCAA AGGTGCCAAG CGCGCCCTGC CACTGGCGGT GAGCGTCCCG
TCGCACTGCG CCCTGATGAA GCCAGCCGCC GAGCGCTTTG CCGAATCGGT CAATGCCATC
GAATGGAAGG CCCCGCAGAT TCCGGTGGTG CAGAACGTCA CTGCAGCCGT CGCCGCCGAC
CTCGATGCCC TCAAGCACGA CCTGCTGGCA CAGCTGTACC AGCCGGTACG CTGGGTCGAG
TGCGTGCAGA CCCTGGCCGC CAACGGTGCG GTCAACCTGG TCGAGTGTGG CCCGGGCAAG
GTGCTGGCTG GCCTTAACAA GCGTTGCGCC GACGGCGTGA CCACCTACAA CCTCAACACC
CCTGACGCCG TTGCTGCCAC CCGCGCGGCA CTGGCCTGA
 
Protein sequence
MSASLAFVFP GQGSQSLGML AELGAEKPVI IETFKEASEA LGYDLWKLVQ DGPEEQLNQT 
DKTQPAILTA SIALWRLWLE EGGAKPAFVS GHSLGEYSAL VAAGSISLKD AVRLVERRGQ
LMQEAVPAGH GAMAAILGLD DAVVVELCAE AAEDEVVSAV NFNSPGQVVI AGNKAAVDRA
MELCKAKGAK RALPLAVSVP SHCALMKPAA ERFAESVNAI EWKAPQIPVV QNVTAAVAAD
LDALKHDLLA QLYQPVRWVE CVQTLAANGA VNLVECGPGK VLAGLNKRCA DGVTTYNLNT
PDAVAATRAA LA