| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1895 |
|---|
| Symbol | |
|---|
| ID | 1043189 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 2137895 |
|---|
| End bp | 2138827 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637145303 |
|---|
| Product | ABC transporter ATP-binding protein |
|---|
| Protein accession | NP_744050 |
|---|
| Protein GI | 26988625 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.0000838668 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTCCG CCCTGTCCAT CCGACAGCTG ACCAAGACCT ACGGCAATGG CTTTCAGGCC
CTCAAAGGCA TCGACCTCGA TGTTGCCGAA GGCGACTTCT TCGCCTTGCT CGGCCCCAAC
GGCGCCGGTA AATCCACCAC CATCGGCATT CTCTCGACCC TGGTGAACAA GACCAGCGGC
ACAGTGAACG TGTTCGGTCA CGACCTGGAC CGCGAGCCCT CCGCGCTCAA GCGTTGCCTG
GGCGTGGTGC CGCAAGAGTT CAACTTCAAC CAGTTCGAAA AGACCTTCGA CATCGTCGTG
ACCCAGGCCG GGTACTACGG CATCCCGCCC AAGCTGGCCA AGGAGCGCGC CGAGCAGTAC
CTGACTCAGC TGGGCCTGTG GGACAAACGT GATGTGCAGT CGCGTTCGTT GTCCGGCGGC
ATGAAGCGGC GCCTGATGAT TGCCCGCGCA TTGATCCACG AACCGCGCCT GCTGATCCTG
GACGAACCCA CCGCCGGGGT GGATATCGAG CTGCGCCGCT CGATGTGGAG CTTCCTCACT
GAGCTGAACC AGAAGGGCAT CACCATCATC CTCACCACCC ACTATCTGGA AGAGGCTGAG
CAGCTGTGCC GTAACATCGG CATCATCGAC CATGGCACCA TCGTCGAGAA CACCAGCATG
CGCCAGTTGC TGGGCAAGCT GCATGTCGAA ACCTTCGTGC TCGACCTCAA GCAGGACCTG
GCCGCGGCGC CGGTACTGCA GGGCTACCCG TGCCGGCTGC TGACCCCGCA TACCCTGGAA
GTGCAGGTGG AGAAGGACAT CGGCATCACC GCGCTGTTCG GCCAGTTGGC GCTGCAGAAC
ATCGAAGTGC AGAGCCTGCG CAACAAGACC AACCGACTCG AGGAGCTGTT CGTGTCCCTG
GTGGAAAAAA ACCTGTCGAA GGTGGCCGTA TGA
|
|---|
| Protein sequence | MSSALSIRQL TKTYGNGFQA LKGIDLDVAE GDFFALLGPN GAGKSTTIGI LSTLVNKTSG
TVNVFGHDLD REPSALKRCL GVVPQEFNFN QFEKTFDIVV TQAGYYGIPP KLAKERAEQY
LTQLGLWDKR DVQSRSLSGG MKRRLMIARA LIHEPRLLIL DEPTAGVDIE LRRSMWSFLT
ELNQKGITII LTTHYLEEAE QLCRNIGIID HGTIVENTSM RQLLGKLHVE TFVLDLKQDL
AAAPVLQGYP CRLLTPHTLE VQVEKDIGIT ALFGQLALQN IEVQSLRNKT NRLEELFVSL
VEKNLSKVAV
|
|---|
| |