| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1882 |
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| Symbol | |
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| ID | 1043211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 2109384 |
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| End bp | 2114282 |
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| Gene Length | 4899 bp |
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| Protein Length | 1632 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637145290 |
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| Product | hypothetical protein |
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| Protein accession | NP_744037 |
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| Protein GI | 26988612 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.517135 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.564659 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTACGG AATCTTCACT GCATTCCAAC GCCCTTAACT TCATGAGTTT CATGGAGAGC
GGTGTCGATA GCCGCACCGG ACAATACACA CTGTCCATCA AACTTCCCGA GTTGGGCGCC
AATTACTTCT CCGGCCCCGA GCTTGAGCTC AGCCTGAACT TCAACCCGCT CAATATGATT
GATTCGGGTT GGGGGCGGGG ATGGAATCTG TCACTGACGC AGTTCGCACC GCATACACAG
GTCATAACCA CGTACAGCGG TGAATCATTC AAAGTGACCG GTAGTTCGGG CTCACGCTTG
CAAATGCAGG AACAACGGCT GGCGCACTTT CACTTCTACC GCGAGCCTGC CGGGCCAGGC
GGCAACGCGC GCTATCGCGT GGTGCACCGT TCAGGCCTGG TGGAGATCCT CGAAGAAATG
GGCAGCGCGA ACGGGCGTAT CGCCCTGCCG GTGGAGATCT ACGCGGCCAC GGGGCACAGG
ATCGACCTCC AGTACCAACC GTTCAACTCG TCTTACATGA TGCTCAGCTC GATCAGCGAC
GAGCGTGAGG AGATCCTGCT GGAAATCGAA CGCGACGATA GCCGCATCGA ATTGCGCGAG
CGCCCTTATC AGGGCGACAA CGGCCAGCCC GTTGCCCTTT ATGCGATGAA CCTGATCAAC
ACGGACTGGG TCACATCGAT CGTGCTGCCA ACCCATGAGC TGGCCAGCTG GCGCCTGGAA
TACGCCCTGG TGAACGGGTT GTTGTGCGTG AGCAAGGTCG AGCCCCCGAC CGGTGCCCGT
GAATATCTCT ACTACCAGGA CCGTGGCCAT CTGTTCCCCG GTGACGCCCG GCCCCCCCTG
CCGCGCGTGA CCCGGCACGT CATCGAACCG CGCGGTGGCC AACCTGCGTT CCAGCGAACC
TATACCTATC CGGGCTTGAA CAACTTTCTG GGTTACGGCG CCGGGATCGG TTGGTCTGAC
AACGGGCTGG ACAACCTGTA CGAGTCGAAA CGGTACGACT ATGAGTATCA AACGGTCGAA
ACCTTGCGCG ACGAGGACGG AACGGCACTG CGCGACATCA CCCGCACCTT CAACCGCTTC
CATCTGCTGA CCTCGACCAG AACCGTGCAG AACAACTGCG TACATGAAGT CACCATGCAG
TACAACATCA AGGACGTCCC CTTCAATCAA CAGGTGTCGA CCCTGCAAAT GCCGATCAGG
GAACAGACAC GCTGGTCGCT GGCGGACAAC ATCACGCGCA GCCGACTTGA AACCGTCGAA
ACCACCTACG ATACATCGGG CAACATCATC TGGCGCAAAC TCGCCAACGG CGTGACCGAG
ACCCAAGAGT GGTATGGCAC CCAAGCGGAA GATGACTACC CCGGTGATGC CAATGGTTTC
GTTCGTCACC TGAAGAGCAA AACCACCACC CCGGCGAGCA GCGGCCGGGG GCAAGCCCCT
GTTCTCACTC AGCACTACCG CTACAAGGCG CTGGCGCCAC TGGCAGGCAA CGCCATCACC
CTCAACCCGA TGATTGTCGA GCACAGTGAA ACCCTGACGC ATGCGCACGA TCCGGCGCAT
CCCCTGGAAG AGAAAATTTA CTATTACCTC GATGCGCCCA AGTCCAGCCT GCGGCACGGC
CGTCGCTATC AGGAGGTGGT GAAACGCAAC AAGCTGGAAA CCACCACCCA GTACCAGTTC
AATTCACTGC TAGACCCTCT GGGCGGCCAT CAGGTACTGG AAACCCGCAA GACCCTCTTT
GGTTACGACG GCGCGCAACG GTCCACCGTT CAACGGCGCT CGCTGCTGCA TGGCGAGAAG
CTCTACGAAC TCAACGAGAA CGGGGTTCAC ACACAATGGG CGTACGACGC CCTGCGCCGA
GTCACCGAGG AAAGGGTATC GCCAGAGACA CCGTTCGAGG CCAAAAAACG CTACGACTAC
CAACTCTGTG CCAGCGATGC CGACATTGCC CGAGCCCGAG TCACCAACGC TCGCGGCATC
ACCACCGAAA CCGAGCTGGA CGGCCTCGGA CGGCCGACCC GGGAGAGCCG TGACAATGTG
CTCGAGGCGA GGCCGGGCGC TTTCTACGAA ATCCTGGCCA TCCAGTACGA TGCGTACGGC
AACCGGATAC AGGAGAGCGT TACCGACTGG CTGCAAGCCC AGCAGTACCT GCACCTGGTA
ACAAAAACGC GGTACGACGA CTGGGGCGAG CAATGCTGCA CCATCGGCCC GGACGACGTG
GAGCAGCACA ACGTACTGGA CCCGATCGGC AACGCCGATC ACCAGGGCGC CATTCGCTAC
AGCTGGCGAG AAGGCGGGAG ACTGAAATCC CGACCCCAGG TGCAGAACCG CAACGGCATG
AACGTCCGAT CCACCCGCCA GGCACGGGCC ATCAGTGGCA AGACCGAGAC CTGGCTCAAC
CTGTTCAACA AGCCGGTACT GCGCAAGCGC CTGGATGCGT TGGGGGAGCT GATTGGCGAA
CGCCGCTACA GCTATGACGG CCTCGGACGC ACGCTCACCG AAACGGATGA GCGCAACCAC
ACCACTGCAT TCAGCTACGA CGCCTGGGGC CGGATGCTCA CGACCGAGCA ACCGAATAAA
ACCCTGCTCA CCCGCACCTA CGCCGAACAC TCTGCCGAAG ACCTGCCGAC CCGCCTGGTG
GTAACCCCGG CGAATGTGCA GTTGCCCGCC CGCCAGATCG GCGCGCAGTA CTTCGACGGC
CTGGACCGCC TGATAGGGAC CACCACCGGT GACCGGACGG AGTACTTCCT GTTCCGCGAC
GGTGAATCGA TACCGCGCCA ACGCATCAAC CCCGCTGGCG AGACCATCGA GCAGGACTAC
AACCTGCAGC TGACCAATGA GCCGATCAGC AACACCGCGC CCGAGGAACA CGCCAGCTTC
GCCTACGACC CTGTCAGCGC CCGATTGCTG AGCGACGACA ACCGGCAATG CGCACGGCGC
TTCGAATACA ACAAAGCCAA TCAGCTGACC GCCGAACACT GGGAGGACAA GCGCGACGGC
AAGACCTGGA GCCGCATTCA TAGCAGCACC TTGCAAGATC GTCTGAAGAA CACCCACGAA
CCCTACGGTG AAGACACCAC CCATGAATAC GACGCCCAGG GCCGCCTGGT CTCAACCCTT
CAGGGGCAGC TGCAGGCCGA GTTCAAATAC GATGATCTGG GCCGCATAGA ACTCATCACA
AGCCATGACC GAGCCAGCGC ACAGGCCCTG GAAACCAAGA TCGAGTACGA CGACCAGGAC
CGTGAAGTCA AACGCACCTG GCGTCAGCCC GGGCAGCCAG AACGCACACA GGAAACCGTC
TGGGACAAGG ATGACCTCCT GCTCAGCCGC ACCCTGCAGG TCGGCGGAGT ATCGCGACTG
GTCGAAAAGT TCGGTTACGA CAGCCATGCA CGCCTGAACA TGTACAACTG CACAGGGCCG
GACCAACCTC GCGATGCGCT GGGCCGCAGC ATCGCCATGC AGGTGTTCAA CTTCGATGCC
TACAACAACA TCGAGTTGAC CGTCACTTCC TTCACAGGTG GGCCGGCCGC TGAACGCGCC
ACGTTCATTC ATGCCGAACG CGACCCCTGC CAGCTGCAGC GTATCGAGTA CACACCGCCG
CGCACCGCGC CCAATCCTGA GTTCAGCTAC GATGCCAATG GCAACCTGAC CCGAGACGAG
CAAGCCCGGC CAATTCGCTA CGACAGCCAG AACCGGTTGC TGGGCCTTAA CGACAGCGGC
GCCCCGGACA CCTATGGCTA CGACGCAGGC GGCTTGCTGG TCAGCAGGCC CGAGGCCGGC
GAGCGCACGC TGCTGCTGCA TGACGGCCAG CGTTTGCGCA TGGCCGTGCG TGACAGCCTG
CAAACCCTGT ACCTGCATCA TGACGAGCAG GCGCTGGGCC AGCAGCAGAA AGGCACTGGT
GCGCAATCGC CCCTGCTGCT GCACACCAGT GCCAGCCACA GCGTGATCGC CGAGAGCCAG
GCCGGCAGCA CGCGCGCCGT CCGTTATACC GCCTATGGCG AGCGGCACGC CGACGATCCA
CTGCTCGGCA CCCTGGGCTA CAACGGCGAA GCGCTCGATC CCGACAGCGG CTGGTACCTG
CTCGGTAGCG GCTACCGCGC CTACAACCCG GTGCTGATGC GCTTTCACAG CCCCGACGCA
CTCAGCCCCT TCGGCGCGGG GGGGCTGAAC TACTACGGCT ATTGCCAAGG CAACCCGATA
ACCTTCCGCG ACCCGACCGG GCATTACAGC ATCGGCTACA GCGGGCAAAG CCGATCGCTG
GCAGACCTGA ATAGCTACAG CATCTGGCGG GGCAAGGCCT TAGGTGCGAT CGGCTGGACG
GGGATAGGCC TGGGCATACT CTTCGCCGCA GTTGCCTCCG TGGCCGCCGT CGTGGTGACA
GGTGGCGTAG CTGCGCCGGC AATCGCGGCT GCCTGGGCAG CCGCCGGTGG CGGCATCAGT
GGCGCGGGTG CGGCACTTTC GGCAGGTGTC GGGGCAATTG CCAGCGTATC GCTCGCCGTC
GGCATCAAGT TGGCGGCCGC GGTGGCTACA GCCACGTTGT CAGTCACCGG TACGGCGCTC
CAAACGGAAG CGATACTTTC GGGGCATGAA AAGCGGAACA ATATTGGGAC AATCCTGAAT
TACTCGGCAG CTATCTTGGG GCTTGCGGTG GGCGCGATGC AGTTGATTGC AAAAATACCA
AATCTTGCAT GGCGCGCTGG CAGTTATACA GTCACAACGA TCACCGACGA CCCTCTAATA
AACAGCGGGA AAACCCTATC CGAATTAAAA ATGGCAAGGC AAATCATCCA CCCAAGAAGC
CCTGTCTCAG TCTCAAAATC CAAGCATTTC TTCCCCGTAG CAGAGGATAT TCCAGTCGGC
CATAAAATAT ATTTACCGTC TACAGAAATC AGACGCTAA
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| Protein sequence | MSTESSLHSN ALNFMSFMES GVDSRTGQYT LSIKLPELGA NYFSGPELEL SLNFNPLNMI
DSGWGRGWNL SLTQFAPHTQ VITTYSGESF KVTGSSGSRL QMQEQRLAHF HFYREPAGPG
GNARYRVVHR SGLVEILEEM GSANGRIALP VEIYAATGHR IDLQYQPFNS SYMMLSSISD
EREEILLEIE RDDSRIELRE RPYQGDNGQP VALYAMNLIN TDWVTSIVLP THELASWRLE
YALVNGLLCV SKVEPPTGAR EYLYYQDRGH LFPGDARPPL PRVTRHVIEP RGGQPAFQRT
YTYPGLNNFL GYGAGIGWSD NGLDNLYESK RYDYEYQTVE TLRDEDGTAL RDITRTFNRF
HLLTSTRTVQ NNCVHEVTMQ YNIKDVPFNQ QVSTLQMPIR EQTRWSLADN ITRSRLETVE
TTYDTSGNII WRKLANGVTE TQEWYGTQAE DDYPGDANGF VRHLKSKTTT PASSGRGQAP
VLTQHYRYKA LAPLAGNAIT LNPMIVEHSE TLTHAHDPAH PLEEKIYYYL DAPKSSLRHG
RRYQEVVKRN KLETTTQYQF NSLLDPLGGH QVLETRKTLF GYDGAQRSTV QRRSLLHGEK
LYELNENGVH TQWAYDALRR VTEERVSPET PFEAKKRYDY QLCASDADIA RARVTNARGI
TTETELDGLG RPTRESRDNV LEARPGAFYE ILAIQYDAYG NRIQESVTDW LQAQQYLHLV
TKTRYDDWGE QCCTIGPDDV EQHNVLDPIG NADHQGAIRY SWREGGRLKS RPQVQNRNGM
NVRSTRQARA ISGKTETWLN LFNKPVLRKR LDALGELIGE RRYSYDGLGR TLTETDERNH
TTAFSYDAWG RMLTTEQPNK TLLTRTYAEH SAEDLPTRLV VTPANVQLPA RQIGAQYFDG
LDRLIGTTTG DRTEYFLFRD GESIPRQRIN PAGETIEQDY NLQLTNEPIS NTAPEEHASF
AYDPVSARLL SDDNRQCARR FEYNKANQLT AEHWEDKRDG KTWSRIHSST LQDRLKNTHE
PYGEDTTHEY DAQGRLVSTL QGQLQAEFKY DDLGRIELIT SHDRASAQAL ETKIEYDDQD
REVKRTWRQP GQPERTQETV WDKDDLLLSR TLQVGGVSRL VEKFGYDSHA RLNMYNCTGP
DQPRDALGRS IAMQVFNFDA YNNIELTVTS FTGGPAAERA TFIHAERDPC QLQRIEYTPP
RTAPNPEFSY DANGNLTRDE QARPIRYDSQ NRLLGLNDSG APDTYGYDAG GLLVSRPEAG
ERTLLLHDGQ RLRMAVRDSL QTLYLHHDEQ ALGQQQKGTG AQSPLLLHTS ASHSVIAESQ
AGSTRAVRYT AYGERHADDP LLGTLGYNGE ALDPDSGWYL LGSGYRAYNP VLMRFHSPDA
LSPFGAGGLN YYGYCQGNPI TFRDPTGHYS IGYSGQSRSL ADLNSYSIWR GKALGAIGWT
GIGLGILFAA VASVAAVVVT GGVAAPAIAA AWAAAGGGIS GAGAALSAGV GAIASVSLAV
GIKLAAAVAT ATLSVTGTAL QTEAILSGHE KRNNIGTILN YSAAILGLAV GAMQLIAKIP
NLAWRAGSYT VTTITDDPLI NSGKTLSELK MARQIIHPRS PVSVSKSKHF FPVAEDIPVG
HKIYLPSTEI RR
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