Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1874 |
Symbol | |
ID | 1043222 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 2097051 |
End bp | 2097539 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637145277 |
Product | glutathione peroxidase |
Protein accession | NP_744029 |
Protein GI | 26988604 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0386] Glutathione peroxidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0631469 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.307231 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGCAA CGATGCTGAA CATCCCCTGC GTGACCCTGG GCGGCGAGCA CAAGACGCTC GGCGACTTCC CGGGCAAGGT GCTGTTGGTG GTCAATACCG CCAGCCAGTG CGGTTTTACC CCGCAGTACA AGGGCCTGGA GCAACTGTGG CAGGCCTATC GCGACCGTGG CCTGGTGGTA CTGGGCTTTC CGTGCAACCA GTTCGGCAAG CAGGAACCTG GCGATGCGCG GGAAATTGCG CAGTTCTGCG AGCGTAATTT CGGCGTGAGT TTTCCGCTGT TTCGCAAGGT CGAGGTCAAC GGCCCGGGCG CTCACCCTCT GTTCGTCGAA CTCAAGCAAC GCGCCCCGGG TATTTTGGGT AGCCAGAAGA TCAAGTGGAA CTTCACCAAG TTTCTGGTCG ACCCGGCCAG TGGCCAGGTC AAGCGCTATG CCCCCACCAC CAAGCCACAG GCCCTGGAGG CGGACATCGA GCGTTTGCTC AGCCGCTGA
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Protein sequence | MAATMLNIPC VTLGGEHKTL GDFPGKVLLV VNTASQCGFT PQYKGLEQLW QAYRDRGLVV LGFPCNQFGK QEPGDAREIA QFCERNFGVS FPLFRKVEVN GPGAHPLFVE LKQRAPGILG SQKIKWNFTK FLVDPASGQV KRYAPTTKPQ ALEADIERLL SR
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