Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1866 |
Symbol | |
ID | 1043230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 2088102 |
End bp | 2089448 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637145269 |
Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
Protein accession | NP_744021 |
Protein GI | 26988596 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3200] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
TIGRFAM ID | [TIGR01358] 3-deoxy-7-phosphoheptulonate synthase, class II |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.374886 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCAAC CGTGGAGCCC CGACAGCTGG CGTGCCCTGC CGATCCAGCA GCAACCGACC TACCCCGATG CCGCGCACCT GCTGAAGGTT GAACAGACCC TGGCCAGCTA CCCGCCGCTG GTGTTCGCGG GTGAGGCGCG CGAGCTGCGC CGGCAGTTCG CCGAGGTCAC CGAAGGCCGT GCCTTTCTGC TTCAGGGCGG TGATTGCGCC GAGAGCTTCG CCGAGTTCTC GGCTGCAAAA ATCCGCGACA CCTTCAAGGT GTTGCTGCAA ATGGCCATTG TCATGACCTT TGCCGCCGGC TGCCCGGTGG TGAAAGTGGG GCGTATGGCC GGTCAGTTCG CCAAACCGCG CTCATCTGGC GATGAAACCA TCGGCGACGT CACCCTCCCC GCCTACCGTG GCGACATCGT CAACGGCATC GGTTTCGACG CCAAAAGCCG CATTCCGGAC CCGGAGCGGC TACTGCAGGC CTACCACCAG GCCACCGCCA GCCTCAACTT GCTGCGAGCG TTCGCCCAGG GCGGGTTTGC CGACCTGCAT CAGGTGCACA AGTGGAACCT GGACTTCATC GCCAACTCGG CGCTGGCCGA CAAGTACCAC CAGTTGGCCA ATCGCATCGA TGAAACCCTG GCGTTCATGC GTGCCTGTGG CCTGGACAGT GCGCCGCAAC TGCGCGAAAC AAGCTTCTTC ACGGCCCACG AAGCGCTGCT GCTGAACTAT GAAGAAGCCT TCGTGCGCCA GGACAGCCTG ACCGGCGACT ACTACGACTG CTCGGCGCAC ATGCTGTGGA TCGGTGACCG CACCCGCCAG CTCGATGGGG CCCATGTGGA GTTTCTGCGT GGCGTGCACA ACCCGATTGG GGTCAAGGTT GGGCCGAGCA TGAACCCCGA AGAGCTGATC CGCCTGATCG ACACGCTCAA CCCGGCGAAC GACCCGGGGC GTTTGAACCT GATCGTGCGC ATGGGCGCGG GCAAGGTTGG CGACCACTTG CCGGGGCTGA TCCGCACTGT CGAGCGCGAG GGGCGCAAGG TGCTGTGGAG TTCCGATCCT ATGCACGGCA ACACCATCAA GGCCAGCAGC GGTTACAAGA CCCGCGATTT TGCGCAGATT CTGGATGAGG TGAAGCAGTT CTTCCAGGTA CACCAGGCCG AGGGCAGCCA CGCCGGCGGT ATCCATATCG AGATGACTGG GCAGAACGTC ACCGAATGCA TCGGTGGTGC CCGGCCGATC ACCGAGGATG CGTTGTCTGA CCGGTATCAC ACCCATTGTG ATCCGCGGAT GAATGCCGAT CAGTCGCTGG AGTTGGCGTT CCTGATTGCC GAAACCCTCA AGCAGGTACG GCGCTAA
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Protein sequence | MNQPWSPDSW RALPIQQQPT YPDAAHLLKV EQTLASYPPL VFAGEARELR RQFAEVTEGR AFLLQGGDCA ESFAEFSAAK IRDTFKVLLQ MAIVMTFAAG CPVVKVGRMA GQFAKPRSSG DETIGDVTLP AYRGDIVNGI GFDAKSRIPD PERLLQAYHQ ATASLNLLRA FAQGGFADLH QVHKWNLDFI ANSALADKYH QLANRIDETL AFMRACGLDS APQLRETSFF TAHEALLLNY EEAFVRQDSL TGDYYDCSAH MLWIGDRTRQ LDGAHVEFLR GVHNPIGVKV GPSMNPEELI RLIDTLNPAN DPGRLNLIVR MGAGKVGDHL PGLIRTVERE GRKVLWSSDP MHGNTIKASS GYKTRDFAQI LDEVKQFFQV HQAEGSHAGG IHIEMTGQNV TECIGGARPI TEDALSDRYH THCDPRMNAD QSLELAFLIA ETLKQVRR
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