Gene PP_1862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1862 
Symbol 
ID1043237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp2083344 
End bp2084093 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content64% 
IMG OID637145265 
Producthypothetical protein 
Protein accessionNP_744017 
Protein GI26988592 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.478353 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAGT GGTTGTTGTA TATCGTGCTG GGCGCAGCCC TAGGCACCAT GGGGGGCTTG 
TTTGGCATTG GTGGCGGGCT GATTGCGATT CCGGCGCTGG GCGTGCTCTT CGGCCTGGAC
CAGCAGTTGG CGCAGGGGAC CGCGTTGGTG ATGGTGGTGC CGAACGTGCT GCTGGCGCTG
TGGCGGTATC ACCAGCGCAA CCGCATCGCG TTTCGCCATG CGTTGCCGCT GTCGGCGTGC
AGCTTCTTGT TCGCCTGGCT GGGGTCGATC TGGGCGGTGG GGCTTGATGC GCATTTCATG
CGCCTGGGTT TTGTCGGCTT CCTGGTAGCG TTGGCGGTGT GGAACGTGGT GCGGATGTTC
ATGAAGGTGT CGCCGCCGAG TGCCGAGCTG CGTCATGCCT GGCCGTGGCT GGGTGTGCTG
GGCAGCTTTG CCGGCACCAT GGGCGGCTTG TTCGGGGTGG GTGGGGCCGT GGTAGCCACG
CCGATCCTGA CCAGTGTGTT TGGCGCTACT CAGGTGGTGG CGCAGGGGCT GTCACTGGCG
CTGGCGGCGC CGAGTACCTT GGTCACGCTG GTGACCTATG GCGTGCACCA CAGCGTTGAC
TGGGGGGTTG GGATTCCCTT GGCGGTGGGT GGCTTGCTCA GCATCAGCTG GGGTGTGAAG
CTGGCCCATG CGTTGCCGGA GAAGGTATTG CGGGCGATGT TCTGTGTGTT CCTGGTGGTC
TGTGCGGTGA TGCTGGCGTT TGAGCTTTGA
 
Protein sequence
MIEWLLYIVL GAALGTMGGL FGIGGGLIAI PALGVLFGLD QQLAQGTALV MVVPNVLLAL 
WRYHQRNRIA FRHALPLSAC SFLFAWLGSI WAVGLDAHFM RLGFVGFLVA LAVWNVVRMF
MKVSPPSAEL RHAWPWLGVL GSFAGTMGGL FGVGGAVVAT PILTSVFGAT QVVAQGLSLA
LAAPSTLVTL VTYGVHHSVD WGVGIPLAVG GLLSISWGVK LAHALPEKVL RAMFCVFLVV
CAVMLAFEL