Gene PP_1808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1808 
Symbolpgi 
ID1043294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp2032517 
End bp2034181 
Gene Length1665 bp 
Protein Length554 aa 
Translation table11 
GC content61% 
IMG OID637145210 
Productglucose-6-phosphate isomerase 
Protein accessionNP_743963 
Protein GI26988538 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0166] Glucose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.339602 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTTCT ACCGTACACC TCACGATGTC ACTGCTCTGC CAGCCTGGAA GGCGCTTCAG 
CAACACCGCG AAGCCATGCG AGGCTTCAGC ATGTCCGAAG CCTTTGCCGC CGATGCCAAG
CGCTTCGACC AGTTTTCCCT TAGCGCTTGC GGCCTGTTCC TCGACTACTC AAAAAACCTG
ATCACCGAGC AAAGCCGCGA TCTGCTGGTC AACCTGGCCA ATGAAGTGGG CCTGCAGGAC
GCCATCAAGT CGATGTTCAG CGGTGAGATC ATCAACGCCT CCGAAGGCCG TCCGGTGCTG
CACACCGCCT TGCGCCGGCC TGTAGGTGAC AAACTCAGCG TCAACGGCGT GAACGTCATG
CCGGAAGTGC ACAAGGTGCT CAACCAGATT ACCGAACTGG TTGGTCGCAT TCACGATGGC
CTGTGGCGCG GCTACAGCGA AAAGCCGATC ACCGACGTGG TCAACATTGG CATTGGCGGT
TCGTTCCTCG GCCCCGAGCT GGTTTCCGAA GCGCTGCTAC CCTACGCCCA GCGCGGCGTG
CGCTGCCACT ACCTGGCCAA TATCGACGGC AGCGAGTTCC ACGAGCTGTC GGCCAACCTG
CGCGCCGAAA CCACCCTGTT CATCGTCTCG TCGAAGTCGT TCAACACCCT CGAGACGCTG
AAAAACGCCA TGGCCGCGCG GACCTGGTAC CTGGCCCAAG GCGGCTCGGA AGCCGAGCTG
TACCGCCACT TCATTGCCGT ATCCAGCAAC AAGGCCGCTG CTGTAGCGTT CGGTATCCGC
GAAGAAAACA TCTTCCCGAT GTGGGACTGG GTGGGTGGGC GCTACTCGCT GTGGTCGGCC
ATCGGCCTGC CGATCGCCCT GGCCATCGGC ACTGCCAACT TCAAGGAACT GCTGTCCGGT
GCCTACACCA TGGACCAGCA CTTCCAGACC GCACCGTTCG ACAAGAACAT GCCGGTGCTA
CTGGCCCTGC TGGGCGTGTG GTATGGCAAC TTCTGGGACG CAAACAGCCA CGCGATCCTG
CCGTACGACC ACTACCTGCG CAACATCACC AAGCACCTGC AGCAGCTGGA CATGGAATCC
AACGGCAAGA GCGTGCTGCA AGACGGTACC CCGGTGAAGA CCGACACCGG GCCGGTGATC
TGGGGCGGCG TGGGCTGCAA CGGCCAGCAT GCCTACCACC AGTTGCTGCA CCAGGGCACC
CAGTTGATTC CGGCCGATTT CATCGTGCCG GTGGTGAGCT TCAACCCGGT GGCCGACCAC
CACCAGTGGC TGTACGCCAA CTGCCTGTCG CAGAGCCAGG CGCTGATGCT GGGCAAAACC
CGCGAGGAAG CTGAAGCCGA ATTGCGCGCT AAAGGCCTCA ACGAAGCAGA CATCGAAAAG
CTGGCCCCGC ACAAGGTGAT CCCGGGTAAC CGCCCGAGCA ACACATTGGT GGTCGAGCGC
ATCAGCCCGC GCCGGCTGGG TGCGCTGGTG GCCATGTACG AGCACAAGGT GTTCGTACAG
AGCGTTATCT GGGGTATCAA CGCCTTCGAT CAGTGGGGCG TCGAGCTGGG CAAGGAACTG
GGCAAGAGCG TTTACCAGCG CTTGGTCGGT AGCCTGGAAG ACAGCGCCGA AGACGGTTCC
ACCCAAGGCC TGATCAATTA CTTTCGTGGT AAACACCGTG GCTGA
 
Protein sequence
MAFYRTPHDV TALPAWKALQ QHREAMRGFS MSEAFAADAK RFDQFSLSAC GLFLDYSKNL 
ITEQSRDLLV NLANEVGLQD AIKSMFSGEI INASEGRPVL HTALRRPVGD KLSVNGVNVM
PEVHKVLNQI TELVGRIHDG LWRGYSEKPI TDVVNIGIGG SFLGPELVSE ALLPYAQRGV
RCHYLANIDG SEFHELSANL RAETTLFIVS SKSFNTLETL KNAMAARTWY LAQGGSEAEL
YRHFIAVSSN KAAAVAFGIR EENIFPMWDW VGGRYSLWSA IGLPIALAIG TANFKELLSG
AYTMDQHFQT APFDKNMPVL LALLGVWYGN FWDANSHAIL PYDHYLRNIT KHLQQLDMES
NGKSVLQDGT PVKTDTGPVI WGGVGCNGQH AYHQLLHQGT QLIPADFIVP VVSFNPVADH
HQWLYANCLS QSQALMLGKT REEAEAELRA KGLNEADIEK LAPHKVIPGN RPSNTLVVER
ISPRRLGALV AMYEHKVFVQ SVIWGINAFD QWGVELGKEL GKSVYQRLVG SLEDSAEDGS
TQGLINYFRG KHRG