Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1803 |
Symbol | wbpV |
ID | 1043299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 2026240 |
End bp | 2027211 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637145205 |
Product | UDP-sugar epimerase |
Protein accession | NP_743958 |
Protein GI | 26988533 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.198516 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.133544 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAGAC GCACAATACT TGTTACAGGC GCTAGCGGCT TTGTCGGTGG CGCACTGTGT CGCCAGCTGG CCACCTTGGG TAGTTTCGCT ATCCGGGCTG CATCGCGCGA CCTTGGCGGG GCCTCCGTGG CCGGTATTCA GGCGGTGACT GTGGCGGACT TGAGCGCCAC CACCGACTGG GCCCGGGCAT TGTCAGGTGT CGACCTAGTG GTGCATGCCG CAGCCCGTGT ACATGTAATG AAGGAAACCG CCAGCGACAG CTTGGCCGAG TTCCGTCGGG TGAATGTCGA CGGCACCCTC AACCTTGCCC GCCAGGCTGC GGCGGCAGGC GTGCGGCGCT TTATTTTCAT AAGCTCGATC AAGGTCAATG GCGAATCCAG CCAGCCCGGT CAGCCGCTGC GTGCCGATGA TAGCCCCGCA CCTCAGGACG CCTACGGCGT GTCCAAGCAC GAAGCGGAGC AGGGGCTGCG CCAGCTAGCG GCCGCCACGG GCATGGAAGT GGTGGTGATA CGACCGGTGC TGGTCTACGG GCCAGGCGTC AAGGCCAATT TCCACAGTAT GATGCGCTGG CTGCAGCGTG GCGTACCCTT GCCGTTCGGC GCGGTTTGCA ACCGTCGCAG CTTGGTCTCG TTGGCTAACC TGGTCGACCT GGTCGTTACC TGCATCGATC ATCCTCGCGC TGCCAACCAA ACCTTCCTGG CCAGCGACGG TGACGATGTC TCGCTCACCC AACTGCTACG TGCACTGGGC CTTGCGCTCG GGCGGCCCGC TCGGCTGTTG CCTGTCCCCG CGGGCCTGTT GCGCGGCGCT GTGCTGTTAA TTGGCCGGCG AGACCTTGCC CAGCGGCTCT TTGGCACGCT GCAGGTAGAC ATTGAAAAAA ACCGGCAATT GCTAGGCTGG TACCCCCCTT GCACATTGGA ACAAGGACTG AACATGACCG CTCGATCTTT TCTGGGTGCA CGCCGCCCAT GA
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Protein sequence | MERRTILVTG ASGFVGGALC RQLATLGSFA IRAASRDLGG ASVAGIQAVT VADLSATTDW ARALSGVDLV VHAAARVHVM KETASDSLAE FRRVNVDGTL NLARQAAAAG VRRFIFISSI KVNGESSQPG QPLRADDSPA PQDAYGVSKH EAEQGLRQLA AATGMEVVVI RPVLVYGPGV KANFHSMMRW LQRGVPLPFG AVCNRRSLVS LANLVDLVVT CIDHPRAANQ TFLASDGDDV SLTQLLRALG LALGRPARLL PVPAGLLRGA VLLIGRRDLA QRLFGTLQVD IEKNRQLLGW YPPCTLEQGL NMTARSFLGA RRP
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