| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1801 |
|---|
| Symbol | wbpY |
|---|
| ID | 1043302 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 2023859 |
|---|
| End bp | 2025001 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637145203 |
|---|
| Product | glycosyl transferase WbpY |
|---|
| Protein accession | NP_743956 |
|---|
| Protein GI | 26988531 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0707089 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTCA TCCTTTCAGT CGAGTCGGTC CGCTTCCCGT TGACCGGCAT CGGGCGCTAC
ACCTATGAAC TGGCGTCACG GCTGCAGCAT GCCGAGCAAA TCAGTGACCT GCGTCTATTT
GCTGGCAGCA GGTTCTTGCC CGAACTGCTC AAGCCTTCGG ACCAGTCCGA CGCCGTGCAT
GGGCTCAAGC GGTTCGTGCA GAAAAATGCC CTGGCGGTTG AAGCTTATCG GCGCCTGATG
CCTTTGTTGC GCAAGCGTGC GTTGCGCGGC CATGAAGACT TCATCTACCA CAGCACCAAT
TTCTACCTGC CGCCGTTTGC AGGGCCGAGA GTGGCGACCT TTCACGACCT GTCGCCCTTT
ACCTGGGCTC ATTGCCACAC GCCGCAGATT GCCCGTTACC TTCAAAAGGA GCTCAAGCTG
ACCCTGGAGC GTGCTGACGC TCTGATCACG GTTTCGCACC ACACGCGGAA GGAGTTGGCG
GATTACTTTG GCTGGCCACT GGAGCGCATT CATGCGGTAC CGCTGGCCAG TTCGCCGCAG
TTCCATCCTC GGACTCCTCA GGCATTGCGT GAAACCCTTG CACGGCACGG CCTGGAGCTA
GGCGGCTACA GCCTGTTCGT CGGTACCATC GAGCCGCGCA AAAACATCGA GACCTTGCTT
AATGCTTACG GCCGCTTGCC ACTTGCGTTG CGCCAGCGTT GGCCGTTGAT CCTCAGTGGG
TATCATGGCT GGCGTAGCGA GGCGATTCAC AGCCGTATCG CCCAGGCACA GCAGGAAGGC
TGGGCGCGCT ACCTCGGCTT CGTTGCCAGT GAAGACTTGC CGCTGCTGTT TGCCGGCGCT
CGGCTGTTCA CCTTCCCGTC GCACTATGAA GGGTTCGGCC TGCCAGTGCT CGAGGCCATG
AGCTCGGGGG TACCGGTGGT ATGTTCCAAC AGCTCGTCGT TGCCAGAGGT AGCGGGTTCG
GCGGCGTTGA TGTGCGCGCC CGATGATGTA GAAGGCCTGA CCGGGTTGTT GCACCAGGGT
CTCGAGGATG AAGCGTGGCG GTCTGCTGCT GTGCAGCGGG GGCTGCTGCA TGCCGGTGGC
TTTTCTTGGG AGCGTTGCGC TCAGGGTACA GTCGAGGTTT ACAAGTCGGT CAAGGAACGA
TGA
|
|---|
| Protein sequence | MKLILSVESV RFPLTGIGRY TYELASRLQH AEQISDLRLF AGSRFLPELL KPSDQSDAVH
GLKRFVQKNA LAVEAYRRLM PLLRKRALRG HEDFIYHSTN FYLPPFAGPR VATFHDLSPF
TWAHCHTPQI ARYLQKELKL TLERADALIT VSHHTRKELA DYFGWPLERI HAVPLASSPQ
FHPRTPQALR ETLARHGLEL GGYSLFVGTI EPRKNIETLL NAYGRLPLAL RQRWPLILSG
YHGWRSEAIH SRIAQAQQEG WARYLGFVAS EDLPLLFAGA RLFTFPSHYE GFGLPVLEAM
SSGVPVVCSN SSSLPEVAGS AALMCAPDDV EGLTGLLHQG LEDEAWRSAA VQRGLLHAGG
FSWERCAQGT VEVYKSVKER
|
|---|
| |