Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1801 |
Symbol | wbpY |
ID | 1043302 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 2023859 |
End bp | 2025001 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637145203 |
Product | glycosyl transferase WbpY |
Protein accession | NP_743956 |
Protein GI | 26988531 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0707089 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTCA TCCTTTCAGT CGAGTCGGTC CGCTTCCCGT TGACCGGCAT CGGGCGCTAC ACCTATGAAC TGGCGTCACG GCTGCAGCAT GCCGAGCAAA TCAGTGACCT GCGTCTATTT GCTGGCAGCA GGTTCTTGCC CGAACTGCTC AAGCCTTCGG ACCAGTCCGA CGCCGTGCAT GGGCTCAAGC GGTTCGTGCA GAAAAATGCC CTGGCGGTTG AAGCTTATCG GCGCCTGATG CCTTTGTTGC GCAAGCGTGC GTTGCGCGGC CATGAAGACT TCATCTACCA CAGCACCAAT TTCTACCTGC CGCCGTTTGC AGGGCCGAGA GTGGCGACCT TTCACGACCT GTCGCCCTTT ACCTGGGCTC ATTGCCACAC GCCGCAGATT GCCCGTTACC TTCAAAAGGA GCTCAAGCTG ACCCTGGAGC GTGCTGACGC TCTGATCACG GTTTCGCACC ACACGCGGAA GGAGTTGGCG GATTACTTTG GCTGGCCACT GGAGCGCATT CATGCGGTAC CGCTGGCCAG TTCGCCGCAG TTCCATCCTC GGACTCCTCA GGCATTGCGT GAAACCCTTG CACGGCACGG CCTGGAGCTA GGCGGCTACA GCCTGTTCGT CGGTACCATC GAGCCGCGCA AAAACATCGA GACCTTGCTT AATGCTTACG GCCGCTTGCC ACTTGCGTTG CGCCAGCGTT GGCCGTTGAT CCTCAGTGGG TATCATGGCT GGCGTAGCGA GGCGATTCAC AGCCGTATCG CCCAGGCACA GCAGGAAGGC TGGGCGCGCT ACCTCGGCTT CGTTGCCAGT GAAGACTTGC CGCTGCTGTT TGCCGGCGCT CGGCTGTTCA CCTTCCCGTC GCACTATGAA GGGTTCGGCC TGCCAGTGCT CGAGGCCATG AGCTCGGGGG TACCGGTGGT ATGTTCCAAC AGCTCGTCGT TGCCAGAGGT AGCGGGTTCG GCGGCGTTGA TGTGCGCGCC CGATGATGTA GAAGGCCTGA CCGGGTTGTT GCACCAGGGT CTCGAGGATG AAGCGTGGCG GTCTGCTGCT GTGCAGCGGG GGCTGCTGCA TGCCGGTGGC TTTTCTTGGG AGCGTTGCGC TCAGGGTACA GTCGAGGTTT ACAAGTCGGT CAAGGAACGA TGA
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Protein sequence | MKLILSVESV RFPLTGIGRY TYELASRLQH AEQISDLRLF AGSRFLPELL KPSDQSDAVH GLKRFVQKNA LAVEAYRRLM PLLRKRALRG HEDFIYHSTN FYLPPFAGPR VATFHDLSPF TWAHCHTPQI ARYLQKELKL TLERADALIT VSHHTRKELA DYFGWPLERI HAVPLASSPQ FHPRTPQALR ETLARHGLEL GGYSLFVGTI EPRKNIETLL NAYGRLPLAL RQRWPLILSG YHGWRSEAIH SRIAQAQQEG WARYLGFVAS EDLPLLFAGA RLFTFPSHYE GFGLPVLEAM SSGVPVVCSN SSSLPEVAGS AALMCAPDDV EGLTGLLHQG LEDEAWRSAA VQRGLLHAGG FSWERCAQGT VEVYKSVKER
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