| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1798 |
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| Symbol | |
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| ID | 1043305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 2020045 |
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| End bp | 2021460 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637145200 |
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| Product | outer membrane efflux protein |
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| Protein accession | NP_743953 |
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| Protein GI | 26988528 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.337857 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0360275 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGTGC TGCGTTTGTT ACCTGGAGTG ATGATGTGCA TGGTCGCCTG GCAAGCGGTG
GCTATGGAAG GGAAGGATGC CGCTGGTGAG CAGCCAAGAG GGGTTTCGGC TTCGACTTAC
GTGTTGGACC TGGCGGGACT GTACCGTGAG GCGCGCCTGG AGGACCCGCG GGTCCTTGCC
GCTTACGCGC GTGCGCGCTC TGCCAGTGAA CAGCAGCGGG CAGCGCTGGG TAGCCTGCTG
CCCCAGGTGT CGGCCAATGC CAACTCCAGC CGCATCCTGC GCAAGAACGA GGCTGAGCGC
GACCTCTATA ACACCGAAAC CTATTCGCTC AGTCTCACCC AGTACCTGTA CAACAAGCCA
GCCTGGGAGC GCTACCAGAA GTCCAAGAGC GTGAAGGATC AAAAAGGTCA TGAAGCTGAA
GACACGCTGG CAGAGGCTAC AGTCGACCTC GCCAAGCGCT ACTTCGTGGC GCTGGCTGCG
GACGACGAGC TGGCGCTGGT GCAGGCTGAG CGCCGGGCAA CCCAAAAAAA CCTTGATCGC
GTCAGCAGCA TGTTCGAACG GCAGATGGCC AAAATCACCG ACAAGCTCGA CATGCAGGCA
CGGGTAGATT TTTTGCTTGC GCAAGAAGTG GAAGCGCGCA ATCAGGTGCA AGTAAGCCGC
GAGGCATTGG CCGAGATCGT CGGGCGGCCG ATTACCGAGC CGCTCAGCCG TGTACGCAAC
GACGTGGCAT TGCAGGCGCC CACCCGGCCC TTACAGAACT GGGTTACCCA AGCAGTTGAA
AACAACCCGT TGCTGAAGTC TTATCAAAGC GGGGCAGAGG CAGCCAATGC AGCGGTGCGC
GAGGGTAAGG GCGAGCACTA TCCGCAACTG TCGTTAAGCT TGAGTGCGCA GCAGAACGAC
CAGGGCTATG ACAATACCCA GGCGCCGCGC AGTGACAGTT ATGTGGCTTC GTTTGGGGTG
AAGATCCCGA TCTACAGCGG TGGCTCCACT TCCGCTCGGG TGCGCGGGTT GTATGATGAT
CAGTTGGCAG CCGAGGAACA GCTGGAAGGG GTGCGGCGCC AGGTGGTCAA GGAAACCACC
ACTGCCTACC TGACTGCACA GGCCGCGGTA GAAAAAATCC GGGCTAACCG CAACGCACTG
TCATCGGCAC AGCATTCCAG TGTTGCGGCG CAGAAGGCGT TCACCTTCGG TGTGGTCAAT
GCTGTGGATG TGCTTACTGC GGTGCAGAAC GAGTTCAAGG CGCGCCGGGA CCTGCTGAAA
ACGCAGTACG ACTTTATTAC CAACCTGTTC CTGCTCAACC GTTGGGCGGG TGAGTTGAAT
CAGGAAAGTG TGGATAACGT CAATGTCTGG TTGAGCCCGG TGCCTGAGAC CAGCCTGCCC
GGTGGCGAGG TTGCTCGCCT GGGCGCCAGT CGCTGA
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| Protein sequence | MIVLRLLPGV MMCMVAWQAV AMEGKDAAGE QPRGVSASTY VLDLAGLYRE ARLEDPRVLA
AYARARSASE QQRAALGSLL PQVSANANSS RILRKNEAER DLYNTETYSL SLTQYLYNKP
AWERYQKSKS VKDQKGHEAE DTLAEATVDL AKRYFVALAA DDELALVQAE RRATQKNLDR
VSSMFERQMA KITDKLDMQA RVDFLLAQEV EARNQVQVSR EALAEIVGRP ITEPLSRVRN
DVALQAPTRP LQNWVTQAVE NNPLLKSYQS GAEAANAAVR EGKGEHYPQL SLSLSAQQND
QGYDNTQAPR SDSYVASFGV KIPIYSGGST SARVRGLYDD QLAAEEQLEG VRRQVVKETT
TAYLTAQAAV EKIRANRNAL SSAQHSSVAA QKAFTFGVVN AVDVLTAVQN EFKARRDLLK
TQYDFITNLF LLNRWAGELN QESVDNVNVW LSPVPETSLP GGEVARLGAS R
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