| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1784 |
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| Symbol | rmlD |
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| ID | 1043323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 1997477 |
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| End bp | 1998379 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637145187 |
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| Product | dTDP-4-dehydrorhamnose reductase |
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| Protein accession | NP_743940 |
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| Protein GI | 26988515 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
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| TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0214489 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00751803 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAAAATCC TGCTGTTGGG GAAAAACGGG CAAGTAGGCT GGGAGCTACA GCGCGCCTTG
GCGCCGCTGG GTGAGGTCAT TGCGCTGGAT CGTCAGGGGG CCGAGGGCTT ATGTGGCGAC
TTGTCCAACC TGGACGGCTT GGCCGCTACG ATTCGTCAGC TGGCGCCGGA CGTGATCGTC
AACGCTGCTG CCTACACTGC AGTGGATAAA GCTGAGAGCG ATCAGGCACT GGCTGCAATG
ATCAATGCCG CGGCTCCTGC TGTATTAGCA CGTGAAACAG CAGCTTTGGG CGCCTGGTTG
ATTCACTATT CCACCGATTA TGTATTTGAC GGCAGCGGCA GTCAGCGCTG GGAGGAAACT
GCGCCTACCG GCCCCCTTTC GGTCTACGGC CGGACCAAGC TGGAAGGCGA GCATGCCATT
CTCGCCAGCG GCGCCAAGGC CGTGGTACTG CGCACCAGCT GGGTGTATGC TGCGCGCGGG
CACAATTTTG CCAAGACCAT GCTGCGCCTG GCGGCGGAGC GTGAGACGTT GAGCGTGGTA
GCAGACCAAT TTGGCGCACC CACGGGCGCT GACCTGATCG CCGACGTTAC TGCACACATC
CTGCGGCAAA TCTTCAATGG GCAAGACAAC CGTCACCTGG CAGGGATTTA CCACTTGGCT
GCGTCCGGTG AAACCTCTTG GCATGGTTTT GCTCAGTTCG TGCTGGCGCA TGCTCAACGC
ACTGGCGTAG CGCTGAAAGT GACAGCTGAT AAGGTTGCCG CAATCAGCAC CGAAGCTTAT
CCAGTACCTG CACCACGTCC GCGCAACTCG CGCCTGGCAC TGGGCAAACT GGAAAACACG
TTCAATTTCA AAATGCCGCT TTGGGAGCAA GGCGTGCAAC GTATGCTGGA CGAAATCCAG
TAA
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| Protein sequence | MKILLLGKNG QVGWELQRAL APLGEVIALD RQGAEGLCGD LSNLDGLAAT IRQLAPDVIV
NAAAYTAVDK AESDQALAAM INAAAPAVLA RETAALGAWL IHYSTDYVFD GSGSQRWEET
APTGPLSVYG RTKLEGEHAI LASGAKAVVL RTSWVYAARG HNFAKTMLRL AAERETLSVV
ADQFGAPTGA DLIADVTAHI LRQIFNGQDN RHLAGIYHLA ASGETSWHGF AQFVLAHAQR
TGVALKVTAD KVAAISTEAY PVPAPRPRNS RLALGKLENT FNFKMPLWEQ GVQRMLDEIQ
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