| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1782 |
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| Symbol | rmlC |
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| ID | 1043325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 1996036 |
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| End bp | 1996584 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637145185 |
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| Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
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| Protein accession | NP_743938 |
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| Protein GI | 26988513 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
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| TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0065723 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCAAGCCA TTCCGCTGGA TATCCCCGAA GTCGTGCTGT TTACCCCCAA GGTTTTTGGC
GACGAACGTG GTTTCTTCTA CGAGAGCTTC AACGCCCGTG TTTTCAGCGA AGTGACCGGC
CTGCAGCCCG ACTTCGTACA AGACAACCAC TCGCGCTCGG TAAAAGGCGT GCTCCGTGGC
CTGCACTATC AGCTGGCACC TCACGCCCAG GGCAAGCTGG TGCGTGTGGT GCAAGGCGAA
GTCTTCGATG TTGCGGTGGA TATCCGTCGC TCGTCCACAA CCTTCGGTAA ATGGGTAGGT
GCGGTGTTGT CGGCCGAGAA CAAGAACCAG CTGTGGATCC CGCCAGGGTT CGCACACGGG
TTCGTCACGT TGAGTGAAAC CGCAGAGTTC CTCTACAAGA CCACCGACTT CTACTCGCCG
CAGTGCGAGC GCTGCATTGC CTGGAATGAT CCGGCAGTGG GTATCGAATG GCCCATCGAC
TCCGTACCAA GCTTGTCTGG CAAGGACCAG CTTGGGGTCG CATTGGCTGA CGCCGAACTG
TTCGACTAA
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| Protein sequence | MQAIPLDIPE VVLFTPKVFG DERGFFYESF NARVFSEVTG LQPDFVQDNH SRSVKGVLRG
LHYQLAPHAQ GKLVRVVQGE VFDVAVDIRR SSTTFGKWVG AVLSAENKNQ LWIPPGFAHG
FVTLSETAEF LYKTTDFYSP QCERCIAWND PAVGIEWPID SVPSLSGKDQ LGVALADAEL
FD
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