| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1779 |
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| Symbol | |
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| ID | 1043334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 1987534 |
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| End bp | 1988751 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637145182 |
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| Product | lipopolysaccharide ABC export system, ATP-binding protein |
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| Protein accession | NP_743935 |
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| Protein GI | 26988510 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0028065 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAGCCTTT TGAGTGTCAG TGATGTGGGC AAAGCCTACA AAACGTACCG TTCGGAACTG
CAACGAATCG CCCACTGGTT CTTTTTGCCC ACTAAGGCAA GCAGTGAACA CTGGGTGTTG
AAACACATCA ACTTTGCAAT TGAACCCGGC GAAGCCATCG GCATTATCGG GCAAAATGGC
GCCGGCAAGT CCACCTTGCT GAAGATGATC ACCGGGACGT TGCAGCCGAC CCAGGGTCGA
GTGCAGGTCA ATGGCCGAAT CGCAGCCATT CTGGAGCTGG GCATGGGTTT CAATCCAGAG
CTCAGTGGCC GCCAGAACGT GTACCACGCT GCGGGTCTGA TGGGTTTCGA TGTACAGCAG
ATCAATGATG TCATTGATGA CATTGAAGCC TTTGCCGAGA TTGGCGAGTA CTTTGATGAG
GCAGTGCGTA CCTATTCCAG CGGTATGCAA ATGCGCGTCG CATTTGCCGT GGCGACTGCG
TTCCGTCCAG AAATCCTTAT CGTCGATGAG GCGCTGTCAG TAGGGGACAG CTATTTCCAG
CACAAGAGTT TTGAGCGCAT CCGTGAGTTC CAGCGGCTGG GAACATCGCT TTTGATAGTG
TCACATGATC GTGGCGCCAT CCAATCGCTG TGCAGCCGGG CCTTGCTTTT GGAAAACGGT
TCCATCATCA AGGATGGGCC ACCAGAGCAG GTCATGGATT ATTACAATGC CCTGATTGCC
GAGAAAGAAA ACAGCACCGT GCAAGTCAAG CAACTGGCTG ATGGCACCGT GCAGACGCAG
TCGGGCAGCG GCGAGGCAAC TATCGGTACC GTTGCTTTGT ACGACATGCA AGGCACGCCT
GTCGAGTTCG TGGCTGTGGG TGACAAAGTG ACCCTGAGCG TGCAAGTAGA GGTGCACGCG
CCGATCCCTG AGCTTGTAGT CGGCTACGTG ATCAAGGACC GTTTAGGCCA ACATGTTTTC
GGTACCAATA CCCACCACTT GGGCAAAGCC CAGAAGGCGC TTGAAACCGG TGAAAAACTG
GAGTACCGCT TCGACTTCGA GATGAATCTG GGGCCTGGTT CCTATTCTGT AGCGGTTGCC
TTGCATGCCA ATGAGGTGCA CATCGGCAGC AATTACGAAT GGCGAGACCT GGCGTTGGTG
TTCAACGTGG TCAATACCTC AAAGCCCCAA TTTGTCGGCA TGGCTTGGGT TCCAACAGCT
GTGGAGTGCA TCCGGTGA
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| Protein sequence | MSLLSVSDVG KAYKTYRSEL QRIAHWFFLP TKASSEHWVL KHINFAIEPG EAIGIIGQNG
AGKSTLLKMI TGTLQPTQGR VQVNGRIAAI LELGMGFNPE LSGRQNVYHA AGLMGFDVQQ
INDVIDDIEA FAEIGEYFDE AVRTYSSGMQ MRVAFAVATA FRPEILIVDE ALSVGDSYFQ
HKSFERIREF QRLGTSLLIV SHDRGAIQSL CSRALLLENG SIIKDGPPEQ VMDYYNALIA
EKENSTVQVK QLADGTVQTQ SGSGEATIGT VALYDMQGTP VEFVAVGDKV TLSVQVEVHA
PIPELVVGYV IKDRLGQHVF GTNTHHLGKA QKALETGEKL EYRFDFEMNL GPGSYSVAVA
LHANEVHIGS NYEWRDLALV FNVVNTSKPQ FVGMAWVPTA VECIR
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