Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1777 |
Symbol | xanA |
ID | 1043339 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 1985379 |
End bp | 1986740 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637145180 |
Product | phosphomannomutase |
Protein accession | NP_743933 |
Protein GI | 26988508 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1109] Phosphomannomutase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.615719 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00889462 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTACCCAC CCATTCAGAC CCGCTGCTTC AAAGCCTATG ACATTCGCGG CCAAGTGCCG GCTGATCTCA ATGAGGATAT TGCCTATCGT ATTGGTCGTG CCTTGGTGGC TGAGCTGGGT GGGCGCAGCT ACGTGGTAGG TCGTGACATG CGCTTGGAAA GTCCGACTCT TTCCCAAGCA TTGATGAGGG GCCTTACTGA AGGCGGCGCC GACGTTATAG ATATTGGCCT TTGTGGCACC GAGGAAGTGT ACTTCGCTAC CAGCCACTAT CAGGCCGACG GTGGCATCAT GGTAACCGCC AGCCATAATC CCAAAGGCTA TAACGGCATG AAACTGGTGC GCGAGCAGTC GCGACCTATC AGTGGTGACA CGGGCCTCAA GGATATTCGC CAGCGGGTGG AATCCGGTGA TTTGGGGACC GCAGCCCCGG CCGCAGGCAG TGTTCGCCTG GCGTCCGACA AAAGCGCTTA CATCGACCAC CTGCTGACCT ATGTGGACCT GGCTACCCTC AAGCCATTGA AAGTTCTGGC GGATCCGGGT AATGGTGCTG TCGGCCCGGT GCTGGAGTTG TTGAAGGCGC GCCTGCCACT GAAGCTCACT GTTATCAATG GGGAACCAGA TGGCAACTTC CCTAATGGCA TCCCCAACCC GCTGCTACCG GAAAACCGTG ACCTTACACG CCAAGCTGTC CTGGATACCG GTGCAGACAT GGGTATTGCC TTCGATGGTG ATTTCGATCG CTGCTTCTTC TTCGACAATC AGGGGCGTTT CATCGAGGGC TACTATGTAG TTGGCCTGTT GGCTGAAATG CTGCTGGCCA AGCACCCAGG CAGCAAAATC ATTCACGACC CGCGCCTGAC CTGGAACACC ATCAAACAGG TCGAAGAAGC AGGGGGAATG GCAATCCAGA GCAAGACCGG CCATGCCTTC ATAAAAGAGC GTATGCGCGC CGAAGATGCT GTATATGGCG GCGAAATGAG CGCCCACCAT TACTTCCGTG ACTTTGCCTA CTGCGACAGC GGTAACATCC CTTGGCTCCT GGTCGCTCAG TTGATGAGCG TAACGGGCAA AAGCCTGGGG CAACTGGTGG ACGAACGTAT TGCAGCGTTC CCGTGCAGTG GCGAAATCAA CTACGAAGTG GAGGATGTTA AAGACACTAT CGAGAAGATT CTTGCTCACT ACTTGCCGCG AAACCCCAGC ATCGACCGCA CCGACGGTAT CAGCGTAGAG TTCGCTGACT GGCGTTTCAG CCTGCGTGGG TCCAACACCG AGCCATTGCT GCGCCTCAAT GTCGAGAGCC GAGGCGATCA GGCTTTGGTT GAGCGCCAGG TTGCACAAAT CGCCGGCTTA ATCAGAGGTT AA
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Protein sequence | MYPPIQTRCF KAYDIRGQVP ADLNEDIAYR IGRALVAELG GRSYVVGRDM RLESPTLSQA LMRGLTEGGA DVIDIGLCGT EEVYFATSHY QADGGIMVTA SHNPKGYNGM KLVREQSRPI SGDTGLKDIR QRVESGDLGT AAPAAGSVRL ASDKSAYIDH LLTYVDLATL KPLKVLADPG NGAVGPVLEL LKARLPLKLT VINGEPDGNF PNGIPNPLLP ENRDLTRQAV LDTGADMGIA FDGDFDRCFF FDNQGRFIEG YYVVGLLAEM LLAKHPGSKI IHDPRLTWNT IKQVEEAGGM AIQSKTGHAF IKERMRAEDA VYGGEMSAHH YFRDFAYCDS GNIPWLLVAQ LMSVTGKSLG QLVDERIAAF PCSGEINYEV EDVKDTIEKI LAHYLPRNPS IDRTDGISVE FADWRFSLRG SNTEPLLRLN VESRGDQALV ERQVAQIAGL IRG
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