Gene PP_1777 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1777 
SymbolxanA 
ID1043339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1985379 
End bp1986740 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content56% 
IMG OID637145180 
Productphosphomannomutase 
Protein accessionNP_743933 
Protein GI26988508 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1109] Phosphomannomutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.615719 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00889462 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTACCCAC CCATTCAGAC CCGCTGCTTC AAAGCCTATG ACATTCGCGG CCAAGTGCCG 
GCTGATCTCA ATGAGGATAT TGCCTATCGT ATTGGTCGTG CCTTGGTGGC TGAGCTGGGT
GGGCGCAGCT ACGTGGTAGG TCGTGACATG CGCTTGGAAA GTCCGACTCT TTCCCAAGCA
TTGATGAGGG GCCTTACTGA AGGCGGCGCC GACGTTATAG ATATTGGCCT TTGTGGCACC
GAGGAAGTGT ACTTCGCTAC CAGCCACTAT CAGGCCGACG GTGGCATCAT GGTAACCGCC
AGCCATAATC CCAAAGGCTA TAACGGCATG AAACTGGTGC GCGAGCAGTC GCGACCTATC
AGTGGTGACA CGGGCCTCAA GGATATTCGC CAGCGGGTGG AATCCGGTGA TTTGGGGACC
GCAGCCCCGG CCGCAGGCAG TGTTCGCCTG GCGTCCGACA AAAGCGCTTA CATCGACCAC
CTGCTGACCT ATGTGGACCT GGCTACCCTC AAGCCATTGA AAGTTCTGGC GGATCCGGGT
AATGGTGCTG TCGGCCCGGT GCTGGAGTTG TTGAAGGCGC GCCTGCCACT GAAGCTCACT
GTTATCAATG GGGAACCAGA TGGCAACTTC CCTAATGGCA TCCCCAACCC GCTGCTACCG
GAAAACCGTG ACCTTACACG CCAAGCTGTC CTGGATACCG GTGCAGACAT GGGTATTGCC
TTCGATGGTG ATTTCGATCG CTGCTTCTTC TTCGACAATC AGGGGCGTTT CATCGAGGGC
TACTATGTAG TTGGCCTGTT GGCTGAAATG CTGCTGGCCA AGCACCCAGG CAGCAAAATC
ATTCACGACC CGCGCCTGAC CTGGAACACC ATCAAACAGG TCGAAGAAGC AGGGGGAATG
GCAATCCAGA GCAAGACCGG CCATGCCTTC ATAAAAGAGC GTATGCGCGC CGAAGATGCT
GTATATGGCG GCGAAATGAG CGCCCACCAT TACTTCCGTG ACTTTGCCTA CTGCGACAGC
GGTAACATCC CTTGGCTCCT GGTCGCTCAG TTGATGAGCG TAACGGGCAA AAGCCTGGGG
CAACTGGTGG ACGAACGTAT TGCAGCGTTC CCGTGCAGTG GCGAAATCAA CTACGAAGTG
GAGGATGTTA AAGACACTAT CGAGAAGATT CTTGCTCACT ACTTGCCGCG AAACCCCAGC
ATCGACCGCA CCGACGGTAT CAGCGTAGAG TTCGCTGACT GGCGTTTCAG CCTGCGTGGG
TCCAACACCG AGCCATTGCT GCGCCTCAAT GTCGAGAGCC GAGGCGATCA GGCTTTGGTT
GAGCGCCAGG TTGCACAAAT CGCCGGCTTA ATCAGAGGTT AA
 
Protein sequence
MYPPIQTRCF KAYDIRGQVP ADLNEDIAYR IGRALVAELG GRSYVVGRDM RLESPTLSQA 
LMRGLTEGGA DVIDIGLCGT EEVYFATSHY QADGGIMVTA SHNPKGYNGM KLVREQSRPI
SGDTGLKDIR QRVESGDLGT AAPAAGSVRL ASDKSAYIDH LLTYVDLATL KPLKVLADPG
NGAVGPVLEL LKARLPLKLT VINGEPDGNF PNGIPNPLLP ENRDLTRQAV LDTGADMGIA
FDGDFDRCFF FDNQGRFIEG YYVVGLLAEM LLAKHPGSKI IHDPRLTWNT IKQVEEAGGM
AIQSKTGHAF IKERMRAEDA VYGGEMSAHH YFRDFAYCDS GNIPWLLVAQ LMSVTGKSLG
QLVDERIAAF PCSGEINYEV EDVKDTIEKI LAHYLPRNPS IDRTDGISVE FADWRFSLRG
SNTEPLLRLN VESRGDQALV ERQVAQIAGL IRG