Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1767 |
Symbol | gyrA |
ID | 1043356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 1971069 |
End bp | 1973840 |
Gene Length | 2772 bp |
Protein Length | 923 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637145170 |
Product | DNA gyrase subunit A |
Protein accession | NP_743923 |
Protein GI | 26988498 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.159029 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.697919 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGAAC TGGCCAAAGA AATCCTCCCG GTCAATATCG AAGACGAACT GAGACAGTCT TACCTCGACT ACGCGATGAG CGTGATTGTC GGGCGAGCGC TGCCCGATGC GCGTGACGGC TTGAAGCCTG TGCATCGCCG CGTTCTCTAT GCGATGAGCG AACTGGGCAA CGACTGGAAC AAGCCGTACA AGAAATCCGC CCGTGTGGTC GGTGACGTGA TCGGTAAGTA CCACCCGCAC GGCGACACTG CGGTCTACGA CACCATCGTG CGTATGGCCC AGCCGTTCTC GTTGCGCTAC CTGCTGGTCG ACGGCCAGGG CAACTTCGGT TCGGTGGACG GCGACAACGC TGCTGCCATG CGATACACCG AAGTGCGCAT GACCAAACTG GCCCACGAAC TGCTGGCCGA CCTGCACAAG GAAACCGTCG ACTGGGTGCC CAACTACGAC GGCACCGAGC AGATCCCGGC GGTCATGCCG ACGCGTATTC CCAACCTGCT GGTCAACGGT TCCAGCGGTA TTGCCGTGGG CATGGCGACC AACATTCCGC CGCATAACCT AGGCGAGGTC ATCGATGGCT GCCTGGCGCT CATCGACAAC CCGGAAGTCA CCATCGATGA GCTGATGCAG CACATCCCTG GCCCGGACTT CCCGACTGCC GGCATCATCA ACGGTCGCCA GGGCATCATC GAGGCCTATC GCACCGGCCG TGGCCGCATC TACATGCGCG CCCGCTCCGA GATCGAGGAC ATCGACAAGG TTGGCGGCCG CCAGCAGATC GTGATCACCG AGCTGCCGTA CCAGCTGAAC AAGGCGCGCC TGATCGAAAA GATCGCCGAG CTGGTCAAAG AGAAGAAGAT CGAAGGCATC ACCGAGCTGC GCGACGAGTC CGACAAGGAC GGCATGCGCA TCGTCATCGA GCTGCGTCGC GGCGAGGTGC CGGAGGTGGT GCTGAACAAC CTCTACCAGC AAACCCAGCT GCAGAGCGTA TTCGGCATCA ACGTGGTGGC CCTGGTCGAC GGCCGTCCGC GCCTGCTCAA CCTCAAGGAC CTGCTCGAAG CGTTCGTCCG CCACCGCCGT GAAGTGGTGA CCCGTCGTAC CGTATTCGAG CTGCGCAAGG CCCGTGAACG TGGCCATATC CTTGAAGGCC AGGCGGTTGC GCTGTCCAAC ATCGACCCGG TCATTGCCCT GATCAAGGCC TCGCCGACGC CGTCCGAAGC CAAGGAAGCC CTGGTCTCCA CGCCGTGGGA ATCCAGTGCC GTGCAGGTCA TGGTCGAGCG CGCCGGCGCC GATTCCTGCC GCCCTGAGGA CCTGCCGGAG CAGTACGGCC TGCACGACGG CAAGTACTTC CTGTCGCCGG AACAGGCCCA GGCCATTCTC GACCTGCGCC TGCACCGCCT GACCGGCCTG GAGCACGAGA AGCTGCTGGC CGAGTACCAG GAAATCCTCG AGCAGATTGG CGAGTTGATC CGCATCCTCA GCAGCGCCGA GCGCCTGATG GAAGTGATTC GCGAGGAGCT GGAGGCCATT CGTGCCGAGT ACGGCGATGT GCGCCGCACC GAAATCCTCA ATGCCAGCCA CGACCTCAAC TACGGCGACA TGATCCCGGA AGAAGAGCGT GTGGTCACCA TCTCCCATGG TGGTTATGCC AAGACCCAGC CATTGTCCGC CTACCAGGCC CAGCGCCGCG GCGGCAAAGG CAAGTCGGCG ACCGGCGTGA AGGACGAGGA CTACATCGAG CACCTGCTGG TCGCCAACAG CCATGCCACC CTGTTGCTGT TCTCCAGCAA GGGCAAGGTT TACTGGAAGA AGACCTACGA AATCCCCGAA GCGTCCCGCG CTGCCCGCGG TCGTCCGCTG GTCAACCTGC TGCCGCTGGA GGAGGGTGAG CGCATCACCG CCATGCTGCA GATCGACCTC GAAGCGCTGC AGCAGAACGC CGACCTCGAC GAAGAACTGG ACGAGGCTGA AGACACCGTG CTCGAGGGTG AGCTGGTAGA GGCCGAGGAA GTCGACGAAG AAGACGGCGA CACCCCGGAG TGGGTTGCAG AGCCGACCGG CGCGTACATC TTCATGGCGA CCGCTTCCGG TACCGTCAAG AAGACCCCGC TGGTGCAGTT CGCCCGTCCG CGCTCCAACG GCCTGATTGC CCTGAAGCTG AAGGAAGGCG ACACCCTGAT TGCCGCGGCC ATCACCGATG GCGCCAAGGA AGTCATGATG TTCTCCGACG CTGGCAAGGT CATTCGCTTT GCCGAGAGCG TCGTGCGTGA AATGGGCCGC AACGCCCGTG GTGTGCGCGG CATGAAGCTG GGCAAAGGCC AGCGGATCAT TTCGATGCTG ATCCCGGAGT CCGGCTCGCA GATCCTCACC GCCTCCGAGC GTGGCTTTGG CAAGCGCACC CCGCTGTCCA AGTTCCCGCG TCGCGGCCGC GGTGGCCAGG GTGTGATCGC CATGGGTACC AAAGGGCGCA ACGGCCTGCT GATCGGGGCT ATCCAGGTGC AGGAAGGCGA GGAGATCATG CTGATTTCCG ACCAGGGCAC GCTGGTTCGC ACCCGGGTTG GCGAGGTGTC CAGCCTGAGC CGCAACACCC AGGGTGTTAC GCTGATCAAG CTGGCGGCCG ATGAGACACT GGTGGGCCTG GAGCGTATCC AGGAGCCGTC CGAGGACGAA CTCGATGAAG TGATCGAGAC GGACGAGGAG GGTGTCGAGG CTGTAGCGCC AGACAATGAA AATGAAGAAG CTGCAGGTGC CGACGAGGCC CCGCAAGAGT AA
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Protein sequence | MGELAKEILP VNIEDELRQS YLDYAMSVIV GRALPDARDG LKPVHRRVLY AMSELGNDWN KPYKKSARVV GDVIGKYHPH GDTAVYDTIV RMAQPFSLRY LLVDGQGNFG SVDGDNAAAM RYTEVRMTKL AHELLADLHK ETVDWVPNYD GTEQIPAVMP TRIPNLLVNG SSGIAVGMAT NIPPHNLGEV IDGCLALIDN PEVTIDELMQ HIPGPDFPTA GIINGRQGII EAYRTGRGRI YMRARSEIED IDKVGGRQQI VITELPYQLN KARLIEKIAE LVKEKKIEGI TELRDESDKD GMRIVIELRR GEVPEVVLNN LYQQTQLQSV FGINVVALVD GRPRLLNLKD LLEAFVRHRR EVVTRRTVFE LRKARERGHI LEGQAVALSN IDPVIALIKA SPTPSEAKEA LVSTPWESSA VQVMVERAGA DSCRPEDLPE QYGLHDGKYF LSPEQAQAIL DLRLHRLTGL EHEKLLAEYQ EILEQIGELI RILSSAERLM EVIREELEAI RAEYGDVRRT EILNASHDLN YGDMIPEEER VVTISHGGYA KTQPLSAYQA QRRGGKGKSA TGVKDEDYIE HLLVANSHAT LLLFSSKGKV YWKKTYEIPE ASRAARGRPL VNLLPLEEGE RITAMLQIDL EALQQNADLD EELDEAEDTV LEGELVEAEE VDEEDGDTPE WVAEPTGAYI FMATASGTVK KTPLVQFARP RSNGLIALKL KEGDTLIAAA ITDGAKEVMM FSDAGKVIRF AESVVREMGR NARGVRGMKL GKGQRIISML IPESGSQILT ASERGFGKRT PLSKFPRRGR GGQGVIAMGT KGRNGLLIGA IQVQEGEEIM LISDQGTLVR TRVGEVSSLS RNTQGVTLIK LAADETLVGL ERIQEPSEDE LDEVIETDEE GVEAVAPDNE NEEAAGADEA PQE
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