Gene PP_1764 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1764 
Symbol 
ID1043363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1968144 
End bp1968815 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content65% 
IMG OID637145167 
Productphosphoglycolate phosphatase 
Protein accessionNP_743920 
Protein GI26988495 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTTGC GAGCAGTACT CTTCGACATG GACGGCACCT TGCTGGACAC GGCGCCGGAC 
TTCATCGCCA TTTGCCAGGC CATGCTCGCC GAACGCGGGC TGCCGGCCGT TGACGACAAC
CTGATCCGTG GCGTGATCTC GGGTGGCGCC CGCGCCATGG TTGCCACTGC GTTCGCCATG
GACCCGGAGG CTGACGGCTT CGAGGCCCTG CGCCTGGAGT TCCTCGAGCG TTACCAGCGC
GACTGCGCGG TGCACAGCAA GCTGTTCGAG GGCATGGCCG AGCTGCTGGC CGACATCGAG
AAAGGCAACC TGCTGTGGGG CGTCGTCACC AACAAGCCGG TGCGCTTCGC CGAGCCGATC
ATGCAGCAAC TGGGCCTGGC CGAGCGTTCG GCGTTGCTGA TCTGCCCGGA CCACGTGAAA
AACAGCAAAC CCGACCCCGA GCCACTGATC CTGGCCTGCA AGACCCTGAA CCTGGACCCG
GCCAGTGTGC TGTTCGTTGG CGACGACCTG CGCGACATCG AGTCTGGTCG CGACGCGGGT
ACCCGCACGG CAGCAGTGCG CTACGGCTAT ATTCATCCAG AGGACAACCC CAACAACTGG
GGTGCCGACG TGGTGGTGGA CCACCCGCTG GAACTGCGCA AAGTGATCGA CAGCGCGCTG
TGCGGGTGCT GA
 
Protein sequence
MRLRAVLFDM DGTLLDTAPD FIAICQAMLA ERGLPAVDDN LIRGVISGGA RAMVATAFAM 
DPEADGFEAL RLEFLERYQR DCAVHSKLFE GMAELLADIE KGNLLWGVVT NKPVRFAEPI
MQQLGLAERS ALLICPDHVK NSKPDPEPLI LACKTLNLDP ASVLFVGDDL RDIESGRDAG
TRTAAVRYGY IHPEDNPNNW GADVVVDHPL ELRKVIDSAL CGC