Gene PP_1762 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1762 
Symbol 
ID1043365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1966342 
End bp1967127 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content62% 
IMG OID637145165 
Producthypothetical protein 
Protein accessionNP_743918 
Protein GI26988493 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG5424] Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTGACG CATTTGTTCG TATCGGGCCT TTGATGGACC CCGCCAGTTA CCCCCAATGG 
GCCCAGCAAC TGATTGAAGA CTGCCGCGAG AGCAAGCGCC GGGTGGTTGA GCATGAGTTT
TATGCACGAC TACGCGATGG CCAGCTGAAG CAATCGACCA TCCGTCAGTA CCTGATCGGG
GGCTGGCCGG TGGTGGAGCA GTTTTCATTG TACATGGCGC ATAACCTGAC CAAGACCCGC
TATGGCCGGC ACCAGGGCGA GGACATGGCG CGGCGCTGGC TGATGCGCAA CATCCGCGTC
GAGCTCAACC ATGCCGACTA CTGGGTGAAC TGGTGCCAGG CGCACGGTGT GCACCTGCAC
GAGTTGCAGG CGCAAGAAGT GCCGCCCGAG CTGAACGGCC TGAACGACTG GTGCTGGCGG
GTGTGCGCTA CCGAGAACCT GGCCATTTCC ATGGCGGCGA CCAACTACGC CATCGAAGGC
GCGACCGGTG AATGGTCAGC GGTGGTGTGC TCGACCGACA CCTATGCGCA GGGGTTCCCT
GAAGAAGGGC GCAAGCGGGC GATGAAGTGG CTGAAGATGC ATGCCCAGTA TGACGATGCG
CACCCGTGGG AGGCGCTGGA AATCATCTGT ACCCTGGCCG GCGAGAACCC CACCCTGGGG
TTGCGGACCG AGTTGCGCAG GGCGATCTGC AAGAGTTACG ACTGCATGTT CCTGTTCCTG
GAGCGCTGCA TGCAGCTGGA AGGGCGCCAG CAAGGCCGTA TGCGGCCGGC GTTGGCTGCG
GGCTGA
 
Protein sequence
MIDAFVRIGP LMDPASYPQW AQQLIEDCRE SKRRVVEHEF YARLRDGQLK QSTIRQYLIG 
GWPVVEQFSL YMAHNLTKTR YGRHQGEDMA RRWLMRNIRV ELNHADYWVN WCQAHGVHLH
ELQAQEVPPE LNGLNDWCWR VCATENLAIS MAATNYAIEG ATGEWSAVVC STDTYAQGFP
EEGRKRAMKW LKMHAQYDDA HPWEALEIIC TLAGENPTLG LRTELRRAIC KSYDCMFLFL
ERCMQLEGRQ QGRMRPALAA G