| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1761 |
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| Symbol | |
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| ID | 1043374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 1963390 |
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| End bp | 1966311 |
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| Gene Length | 2922 bp |
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| Protein Length | 973 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637145164 |
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| Product | sensory box protein/GGDEF family protein |
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| Protein accession | NP_743917 |
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| Protein GI | 26988492 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.869454 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTTCCTC AGCGGCCGCA CCACGCTGAT CATCGCCCAC CGCTTGTCGG CGGTGAAACA
GGCCGACCGG GTGCTGGTGT TCGATGGCGG GCACGTGGCC GAAGACGGCG ACCATCAGCA
GCTGATTGCC GAGGGTGGGT TATACGCCAA GCTGTATGGG CATCTGCAGC AGAGCTGATT
ATCTGGCTGC CTTCACCGGG CTTTTGGGAG CAACTGTCTT GCTCAATTTC TAAAAGCTGG
TGCGACCCTG TGGGAGCGGG CTTGCCCGCG AACACGGGCG AAGCCCGTGC CATCCACCGC
GGTGTCTTCT TCGCGGGTAA ACCCGCTCCT ACAATAGCCA GCGCATACGC TGTACAAATT
CCCCGATTCC TTGTCATAAA AATCCCCTCC ACAGCGATGG CAAATGGCCT ACGCTGTGCT
TGTCTGGGTC GATTTACGCC TTATCTGCTC TGTGACAGGG ACTCCATGAA GGGACATCGC
ACACTCGAAG CGCCAAAGTT GCTCGGCATC ACCTGGCCTT TCATCGCCGT CGTGGTCCTT
CAGGTGGCGC TGGGCAGCCT CAGCCTTTAT ACGCTCTCGG CCGTGCGTGC CTATGTCGCG
GGCGAAAGCC TGTGGTCCAA GGCGCAGAAA GATGCCATCT ACTACCTCAG TCTGTACGGC
GAGACGCAGG ACGACAGCAC CTACCAGCGC TATCGCCAGG CCATTACCGT GCCCCAGGGT
GACCATCGTC TGCGCGAGGT GCTCGACCAC CCCAGCCCTG ATCTGAACGC CGCGCGACAG
GCGGTTCTGC AAGGTGGCAA CCACCCTGAC GATGTCGATC GGATCATCTG GTTCTACCGC
AACTTTCGCC ATGTCAGCTA CATGCAGACA GCCATCGATT ACTGGGACAT CGGTGACGAC
TATCTGGCCA AGCTGGATGT ACTGGCCGGT GAAATGCGCC AGCGTTTTGC CAATGGCCCG
GCGGATCCAG ACACTGTCAG CGATTGGAAG GCCCGCATTG TCGCCATCAA CGAAGGCGTG
ACCCCGGCGG CCAAGGCCTT CAGTGATGCC TTGGGTGAAG GCTCGCGCAT GTTGCTGCGG
GTGCTGCTGA TCACCAACCT GCTGACCGCA ATGTTCCTGA TCGCCATTGC CTGGCGCCGC
TCCAGCAAGC TGTTGGCCCA GCGCCAGGCC TTTGCCAGCG CCCTGCAGGA AGAAAAAGAG
CGTGCGCAGA TTACCCTGCA GGCCATCGGG GATGCGGTGA TTACAACCGA TGTCGAGGGC
AATATCGGCT ACATGAACCC GGCCGCCGAG CAGTTGACCC ACTGGCAATC CGGCCAGGCC
CAGGGCCTGC CGCTGTCGGC ACTGTTCAGC CTGGTGGATG AGCACGCCGA GGAGGATGGT
CGCAGCTTGG TCGAGCAGGT GCTCAGCGGC AGCCTCAAGG GCGGCTCCGA GCATGCCCGG
CTGATCCAGC GCCTGGACGG CAGTACCGTG TCGATCAACC TGGTAGGCTC GCCGATCCTC
AATGATGGCC AGGTCAGTGG CATCGTACTG GTGCTGCACG ACATGACCCA GGAACGCCAG
TACATCGCCA ACCTGTCCTG GCAAGCAACC CACGATGCGC TGACCGGGCT GGCCAACCGC
CGCGAGTTCG AATACCGCCT GGAGCAGGCG CTCAACGACC TGGCGCGCCA GGCCGGGCGG
CATTCGCTGA TGTTCCTCGA CCTCGACCAG TTCAAGCTGG TCAACGACAC CTGTGGCCAC
GCTGCCGGCG ATGAGTTGCT GCGGCACATC TGCGCGGTGC TGCAATCCGG CCTGCGTGAG
GGCGATACGC TGGCGCGGCT GGGCGGCGAT GAATTTGGCG TGCTGCTGGA AAACTGCCCG
CCCGACCAGG CCGAGCGCAT TGGCGAACAA TTGCGCCAGA TGGTGCAGAG CCTGCACTTT
GTATGGAAAG GGCGGCCTTT CGTGACCACG GTCAGCATTG GCCTAGTGCA CATGGCCCAG
GCCCCCGGTA CCCTGGAGGC TTCGCTGCGC GCCGCCGACA TGGCCTGCTA CATGGCCAAG
GAAAAGGGCC GAAACCGTGT GCAGGTGTAC CACGCCGACG ACAGCGAGCT GTCCATGCGT
TTTGGCGAAA TGGCCTGGAT CCAGCGCTTG CATGTGGCCC TGGAAGAAAA CCGCTTTTGC
CTCTACGCCC AGGAAATCGC CCCGCTCAAA ACCTTCGAGG GCCCGGGCCA TATCGAAATT
CTGTTGCGCC TGCACGACGA AAGCGGTCGC ACCATCCTGC CCAGCAGCTT CATCCCGGCG
GCCGAGCGCT ACGGCCTGAT GACCGCGCTG GACCGCTGGG TGGTGCGCAA TGTGTTCATG
GTCATACGCA AGTGCCTGGA AGAAGGGCGT GAAGGGCCGT TGTCGACCTG TGCCATCAAC
CTGTCGGGGT CCAGCATTGG CGACGACAAG TTCCTTGAAT ACCTCCAGCG GTTGTTCGTC
GAATACGCCA TTCCGCCGCG AATGATCTGC TTTGAAATTA CCGAAACCAG CGCCATTGCC
AACCTGGGCA GCGCCATTCG CTTCATCAAC GAGCTGAAAG GGCTGGGTTG CCGTTTCTCG
CTCGATGATT TTTGCGCCGG CATGTCCTCG TTCGCCTATC TCAAGCATTT GCCCGTGGAC
TACCTGAAGA TTGACGGCAG TTTCGTCAAG GACATGCTCG ACGACCCGGT CAACCGGGCC
ATGGTCGAGG TCATCAACCA TATCGGCCAT GTGATGGGTA AGCGCACGAT TGCCGAGTTC
GTCGAAACAC CCTTGATCGA GCAGGCCTTG CAGGAAATAG GCGTGGATTA CGCCCAGGGC
TACCTGATCG AACGCCCCCA GGTGTTCACC TGTGACAGTC TGCAGCGCCA ACGGATCGCC
GCCCGGCCTC TGTTGCAGCG AGCACCTGGC ACATTTCGCT AG
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| Protein sequence | MLPQRPHHAD HRPPLVGGET GRPGAGVRWR ARGRRRRPSA ADCRGWVIRQ AVWASAAELI
IWLPSPGFWE QLSCSISKSW CDPVGAGLPA NTGEARAIHR GVFFAGKPAP TIASAYAVQI
PRFLVIKIPS TAMANGLRCA CLGRFTPYLL CDRDSMKGHR TLEAPKLLGI TWPFIAVVVL
QVALGSLSLY TLSAVRAYVA GESLWSKAQK DAIYYLSLYG ETQDDSTYQR YRQAITVPQG
DHRLREVLDH PSPDLNAARQ AVLQGGNHPD DVDRIIWFYR NFRHVSYMQT AIDYWDIGDD
YLAKLDVLAG EMRQRFANGP ADPDTVSDWK ARIVAINEGV TPAAKAFSDA LGEGSRMLLR
VLLITNLLTA MFLIAIAWRR SSKLLAQRQA FASALQEEKE RAQITLQAIG DAVITTDVEG
NIGYMNPAAE QLTHWQSGQA QGLPLSALFS LVDEHAEEDG RSLVEQVLSG SLKGGSEHAR
LIQRLDGSTV SINLVGSPIL NDGQVSGIVL VLHDMTQERQ YIANLSWQAT HDALTGLANR
REFEYRLEQA LNDLARQAGR HSLMFLDLDQ FKLVNDTCGH AAGDELLRHI CAVLQSGLRE
GDTLARLGGD EFGVLLENCP PDQAERIGEQ LRQMVQSLHF VWKGRPFVTT VSIGLVHMAQ
APGTLEASLR AADMACYMAK EKGRNRVQVY HADDSELSMR FGEMAWIQRL HVALEENRFC
LYAQEIAPLK TFEGPGHIEI LLRLHDESGR TILPSSFIPA AERYGLMTAL DRWVVRNVFM
VIRKCLEEGR EGPLSTCAIN LSGSSIGDDK FLEYLQRLFV EYAIPPRMIC FEITETSAIA
NLGSAIRFIN ELKGLGCRFS LDDFCAGMSS FAYLKHLPVD YLKIDGSFVK DMLDDPVNRA
MVEVINHIGH VMGKRTIAEF VETPLIEQAL QEIGVDYAQG YLIERPQVFT CDSLQRQRIA
ARPLLQRAPG TFR
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