Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1755 |
Symbol | fumC-2 |
ID | 1043414 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 1957666 |
End bp | 1959060 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637145158 |
Product | fumarate hydratase |
Protein accession | NP_743911 |
Protein GI | 26988486 |
COG category | [C] Energy production and conversion |
COG ID | [COG0114] Fumarase |
TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.208528 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCCGTA TCGAGACAGA CAGCCTGGGC CCGGTCGAAG TTCCGGAGGA CGCCTACTGG GGTGCGCAGA CCCAGCGTTC GCTGATCAAC TTCGCCATTG GCAAGGAACG CATGCCCCTC GCGGTATTGC ACGCCCTGGC ACTGATCAAG AAGGCCGCGG CGCGCGTCAA CGACCGCAAT GGCGACCTGC CGGCCGACAT CGCCCGGTTG ATCGAACAGG CCGCCGATGA AGTGCTGGAT GGCCAGCACG ACGATCAGTT CCCGCTCGTC GTCTGGCAGA CGGGCAGTGG CACCCAAAGC AACATGAACG TCAACGAGGT GATCGCCGGA CGCGCCAACG AACTGGCCGG CAAAGGCCGT GGCGGCAAGG CGCCAGTACA CCCCAATGAC CACGTCAACC GCTCGCAGAG CTCCAACGAC TGCTTCCCCA CCGCCATGCA CATTGCCGCA GCCCAGGCGG TGCATGAAAA GCTGCTGCCG GCCGTCACTG AACTGTCTTC GGGGCTGGCC GAGCTGTCGA TGCGCCACCA CAAGCTGGTA AAAACCGGCC GCACGCACAT GATGGACGCC ACGCCGATTA CCTTCGGCCA GGAAGTGTCG GCTTTCGTCG CCCAGCTCGA TTACGCCCAG CGCGCTATCC GCGCCACCCT GCCGGCGGTG TGCGAACTGG CCCAGGGCGG CACTGCCGTG GGTACCGGGC TGAACGCTCC GCAGGGTTTT GCCGAGGCCA TCGCGGCCGA GCTGGCGGCG CTGTCCGGCC TGCCGTTCAT CACTGCACCC AACAAGTTCG CCGCCCTCGC CGGCCACGAA CCGCTGACCA GCCTGGCGGG AGCCCTGAAG ACCCTGGCCG TGGCCCTGAT GAAAATCGCC AACGACCTGC GCCTGCTGGG GTCCGGCCCT CGCGCCGGGC TTGCCGAGGT GCGCCTGCCA GCCAACGAGC CGGGCAGCTC GATCATGCCG GGCAAGGTCA ACCCCACCCA GTGCGAGGCG CTGTCGATGC TGGCCTGCCA GGTACTGGGC AACGACGCGG CCATCGGCTT TGCCGCCAGC CAGGGGCATT TGCAGTTGAA TGTGTTCAAG CCGGTGATCA TTCATAACCT GCTGCAATCC ATCGAGTTGC TGGCCGATGG TTGCCGCAAC TTCCAGCAGC ATTGCGTGGC GGGTATCGAG CCGGATGCCG AGCAGATGGC CGCGCACCTG GAGCGTGGGT TGATGCTGGT GACGGCGCTG AACCCGCATA TTGGCTATGA CAAGGCGGCA GAAATTGCCA AGAAGGCTTA CAGCGAGGGC ACGACCTTGC GCGAGGCGGC ATTGGCGTTG AAGTACCTGA CCAATGAACA GTTCGACCAG TGGGTGCGGC CGGAGAACAT GCTGGCGCCT GGGGGCAAAG GCTAG
|
Protein sequence | MSRIETDSLG PVEVPEDAYW GAQTQRSLIN FAIGKERMPL AVLHALALIK KAAARVNDRN GDLPADIARL IEQAADEVLD GQHDDQFPLV VWQTGSGTQS NMNVNEVIAG RANELAGKGR GGKAPVHPND HVNRSQSSND CFPTAMHIAA AQAVHEKLLP AVTELSSGLA ELSMRHHKLV KTGRTHMMDA TPITFGQEVS AFVAQLDYAQ RAIRATLPAV CELAQGGTAV GTGLNAPQGF AEAIAAELAA LSGLPFITAP NKFAALAGHE PLTSLAGALK TLAVALMKIA NDLRLLGSGP RAGLAEVRLP ANEPGSSIMP GKVNPTQCEA LSMLACQVLG NDAAIGFAAS QGHLQLNVFK PVIIHNLLQS IELLADGCRN FQQHCVAGIE PDAEQMAAHL ERGLMLVTAL NPHIGYDKAA EIAKKAYSEG TTLREAALAL KYLTNEQFDQ WVRPENMLAP GGKG
|
| |