Gene PP_1746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1746 
Symbol 
ID1043426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1946047 
End bp1946226 
Gene Length180 bp 
Protein Length59 aa 
Translation table11 
GC content60% 
IMG OID637145149 
Productcarbon storage regulator, CsrA 
Protein accessionNP_743902 
Protein GI26988477 
COG category[T] Signal transduction mechanisms 
COG ID[COG1551] Carbon storage regulator (could also regulate swarming and quorum sensing) 
TIGRFAM ID[TIGR00202] carbon storage regulator (csrA) 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGTAA TAGGGCGCGA AGTAGGGGAG GTCATCGTGA TTGGCGATGA CATCCGGATC 
ATGGTGGTAG AGACCCGGGA CGGCGTGGTG CGCTTTGGTG TGGCTGCTCC GCGTGAGGTG
CCGGTGCATC GAGCCGAAGT TTACAAGCGC ATCAAGGCGT CCAAGCAGAG CAAGGCCTGA
 
Protein sequence
MLVIGREVGE VIVIGDDIRI MVVETRDGVV RFGVAAPREV PVHRAEVYKR IKASKQSKA