Gene PP_1740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1740 
Symbol 
ID1043436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1939696 
End bp1941273 
Gene Length1578 bp 
Protein Length525 aa 
Translation table11 
GC content66% 
IMG OID637145143 
Productbeta (1-6) glucans synthase, putative 
Protein accessionNP_743896 
Protein GI26988471 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG5309] Exo-beta-1,3-glucanase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTGCCAGA CGATGGACCG CCACATGCCC AGTTGTAGCC GCCTGTTATT GCCGTTGTAC 
CTGCTAGCCT GCCTGCTGGC CCTGGTCGGG CTGGGGGGGC TCTGGTACGG GCTGGGCAAG
CCTGTGCACC TGCCCGATGC GGCCAGCCCT GCACACAAGC TGCAATGCGC TTCGTACACG
CCGTTCGACA AAGACCAGTC GCCTTACGAC CAGCCGTTTC GCCTGCGCCC AGCGCGGATG
GACGCCGACC TGGCGTTACT GGCCGAGCGG TTTCAGTGCA TCCGTACCTA TTCCATGAGC
GGTCTTGAGG CAATCCCGGC GCTGGCACGC AAGCATGGGC TGAAGGTGAT GCTGGGCGCC
TGGGTGAACG CCCACCCGGC CGACACCGAG AAGGAAATCA ACCTGCTGAT CGCTGCTGCC
AACGCCAACC CTGACGTGGT CAGCGCCGTG ATCGTCGGCA ATGAGACACT GTTGCGCAAG
GAGGTGACCG GTGCCCACCT GGCCAAATTG ATCGCACGGG TGAAGCGCCA GGTCAAGGTG
CCCGTGACCT ACGCCGATGT CTGGGAATTC TGGCTGCAGC ACCCGCAGGT GGCCCCGGTA
GTGGACTTCC TGACCATCCA TCTTCTGCCC TACTGGGAGG ACGACCCGCG TGGCATCGAC
GATGCTTTGG CCCACGTTGC CGATGTGCGC CGGGTGTTCG GCACACGCTT CGCGCCCAAG
GACATACTGA TTGGCGAAAC CGGCTGGCCC AGCGAAGGCC GCCAACGCGA AACGGCGGTG
CCCAGCCGGG TCAATGAGGC GCGCTTCATC CGTGGCTTCG TGGCCATGGC CGAGCGCAAT
GGCTGGCACT ACAACCTGAT CGAAGCCTTC GATCAGCCCT GGAAACGCGC CAATGAGGGC
GCGGTGGGTG GTTACTGGGG GCTATACGAC GCGGACCGAC AGGACAAAGG CGTGCTCGAA
GGGCCCGTGA GCAACCTGCA TGACTGGCCG CAGTGGTTGC TGGCCAGCGC CGTGCTGACG
GTGATCATGC TGGTGCTGGC CGGGCGCCCC GCTACACCGA TGGCCGCCGT GCTGCTGCCA
CTGCTGGCAG CGTTTGGCGC CGCTTGCCTG GGCCTGTGGG GCGAGTTGAT GCGCACCCAT
GCGCGCTTTG CCGGGGAATG GCTGTGGGCA CTGATGCTGG CCGGGCTGAA CCTGCTGGTA
CTGGCCCATG CGTTGTTGGC GCTGGCGCGG CGGGCCGGCT GGCGTGAACG CTTGTTCGCC
TGGCTGCAGG TGCGAGCCGG CTGGCTGTTG CTGGCGGCGG GCTTCGCTGC GGCGGTGAGC
ATGCTGGCAA TGGTGTTCGA CCCACGCTAC CGCAGCTTCC CCAGCGCGGC GCTGGCGTTG
CCGGCGCTGG TTTATGTGCT GTGGCCGGTG CGGGCGCGAC GGGCGGAGGT GGCGTTGCTG
GCGTTCATCG TCGGCGCCGG GGTGGCGCCG CAGTTGTTCG TGGAAGGGCT GGAGAACCAG
CAGGCCTGGG GCTGGGCGGT GGTGAGTGTG CTGATGACAG CGGCATTGTG GCGAAGCCTG
CGGATGCGCC AGGCTTGA
 
Protein sequence
MCQTMDRHMP SCSRLLLPLY LLACLLALVG LGGLWYGLGK PVHLPDAASP AHKLQCASYT 
PFDKDQSPYD QPFRLRPARM DADLALLAER FQCIRTYSMS GLEAIPALAR KHGLKVMLGA
WVNAHPADTE KEINLLIAAA NANPDVVSAV IVGNETLLRK EVTGAHLAKL IARVKRQVKV
PVTYADVWEF WLQHPQVAPV VDFLTIHLLP YWEDDPRGID DALAHVADVR RVFGTRFAPK
DILIGETGWP SEGRQRETAV PSRVNEARFI RGFVAMAERN GWHYNLIEAF DQPWKRANEG
AVGGYWGLYD ADRQDKGVLE GPVSNLHDWP QWLLASAVLT VIMLVLAGRP ATPMAAVLLP
LLAAFGAACL GLWGELMRTH ARFAGEWLWA LMLAGLNLLV LAHALLALAR RAGWRERLFA
WLQVRAGWLL LAAGFAAAVS MLAMVFDPRY RSFPSAALAL PALVYVLWPV RARRAEVALL
AFIVGAGVAP QLFVEGLENQ QAWGWAVVSV LMTAALWRSL RMRQA