Gene PP_1726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1726 
Symbol 
ID1043451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1925798 
End bp1926862 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content62% 
IMG OID637145130 
ProductABC transporter, periplasmic binding protein 
Protein accessionNP_743883 
Protein GI26988458 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1840] ABC-type Fe3+ transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.477367 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0250834 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGT TCTTCATGGC GTCACTGCTT GGTTCGGCCA TCGCGTTGTG CACCACGGCC 
ATGGCAGCCA GCACTGACCT CAAGGCCCTG GAAGACGCCG CCCGCAAGGA AGGCACTGTC
AACAGCGTGG GCATGCCCGA CGCCTGGGCA AACTGGAAAG GCACCTGGGA AGACCTGGCC
AGCAAGTACG GCCTCAAGCA CAGCGACACC GACATGAGCT CGGCCCAGGA ACTGGCCAAG
TTCGAAGCCG AGAAGGACAA CGCCAGCGCC GACATCGGTG ACGTGGGTGC CGCCTTCGGC
CCGATCGCGG TGACCAAGGG CGTCAGCCAG CCTTACAAGC CAAGCACCTG GGACCAGGTG
CCGGAATGGG CCAAGGACAA GGACGGCCAC TGGGCGCTGG CCTATACCGG CACCATCGCT
TTCATCATCA ACAAGGACCT GGTCAAGGAA GAGGAACGGC CGAAAACCTG GCATGACCTG
GAGAAAGGCA AGTACAAGGT CGCCATCGGT GACGTCGGCA CCGCCGCCCA GGCCGCCAAC
GGTGTGCTGG CTGCGGCCAT CGCCTACAAG GGTGACGAAA GCAACGTGGC GCCGGGCCTG
CAGCTGTTCA CCAAGCTGGC GCAGCAGAAG CGCCTGTCAC TGGCCAACCC GACCATCCAG
ACCCTGGAAA AGGGCGAAGT GGAAGTTGGC GTGGTGTGGG ACTTCAACGG CCTGAGCTAC
CGTGAACAGA TCGACCCCAA GCGTTTTGAA GTGCTGATCC CCTCGGACGG CTCGGTGATT
TCCGGCTATA CCACGGTCAT CAACAAGTAC GCCAAGCACC CCAACGCGGC CAAGCTGACC
CGTGAATACA TCTTCAGCGA CGCCGGGCAG ATCAACCTGG CCAAGGGCCA TGCGCGGCCG
ATCCGGGCCG AGCACCTGAA GCTGCCGGCG GATGTGCAGG CCAAGCTGCT GCCCAACGAC
CAGTACGCTG CCGCCCAGCC GATCAAGAAT GCCGAAGCCT GGGAAGCCAC CTCGAAGAAA
CTGCCGCAGA TGTGGCAGGA GCAGGTGATC ATCGAGATGG AGTAA
 
Protein sequence
MKKFFMASLL GSAIALCTTA MAASTDLKAL EDAARKEGTV NSVGMPDAWA NWKGTWEDLA 
SKYGLKHSDT DMSSAQELAK FEAEKDNASA DIGDVGAAFG PIAVTKGVSQ PYKPSTWDQV
PEWAKDKDGH WALAYTGTIA FIINKDLVKE EERPKTWHDL EKGKYKVAIG DVGTAAQAAN
GVLAAAIAYK GDESNVAPGL QLFTKLAQQK RLSLANPTIQ TLEKGEVEVG VVWDFNGLSY
REQIDPKRFE VLIPSDGSVI SGYTTVINKY AKHPNAAKLT REYIFSDAGQ INLAKGHARP
IRAEHLKLPA DVQAKLLPND QYAAAQPIKN AEAWEATSKK LPQMWQEQVI IEME