Gene PP_1725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1725 
Symbol 
ID1043452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1924862 
End bp1925698 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content65% 
IMG OID637145129 
Producttype I phosphodiesterase/nucleotide pyrophosphatase 
Protein accessionNP_743882 
Protein GI26988457 
COG category[R] General function prediction only 
COG ID[COG1524] Uncharacterized proteins of the AP superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0109136 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCAACGC GGTTCATGAC TGGAGAAAAC ATGCAACACA ACGTCATCCT GGTCCTGCTC 
GACGGCCTCA ACTATCAGGT CGCCCACCAT GCGATGGGCC ACCTGCACGC CTACGTCGAG
GCCGACCGCG CCGCGCTGTA CCGCGTGGAA TGCGAGCTGC CATCGCTGTC GCGGCCGCTG
TACGAATGCA TCCTCACCGG CGTGCCACCG ATCGACAGCG GCATCGTGCA CAACAACATC
AACCGCCTGT CCAACCAACG CAGCGTGTTT CACTACGCCC GCGAGGCCAA CCTGGGCACT
GCAGCGGCGG CTTATCACTG GATGAGCGAG CTGTACAACC GCTCGCCCTT CGACCCGCAG
CGTGACCGCC ACACCCACGC GCCGAAGCTG CCGATCCAGC ACGGGCTGTT CTACTGGGAC
GACCGTTACC CCGATTCGCA CCTTCTGGCC GATGGCGAGT ACCTGCGCCG CCGTCACGCG
CCCAACTTCC TGCTGGTGCA CCCGATGAGC GTTGACGACG TGGGCCACCG CCACGGCCTG
GACAGCAGCC AGTATCGCAA CGCTGCGCGC AGCGTCGACA TCCTGCTGGC CGACTACCTG
CCCGGCTGGC TCGAAGAGGG CTACCAGGTA TTGGTCACCG CCGACCACGG CATGAACAAC
GACCGCTCGC ACAACGGCCT GCTGGCGGAA GAACGTGAAG TGCCGCTGTT CGTCTTCGGC
GATGCCTTCA GCCTGGACCC GGCCGCCAAA CCGCTGCAAA CCGAACTGTG CGGCACCATC
TGCGAGCTGC TGGGTGCCGC GCACGACAAG ACGGTTTGCC GGGAGCTGCT GAAGTGA
 
Protein sequence
MPTRFMTGEN MQHNVILVLL DGLNYQVAHH AMGHLHAYVE ADRAALYRVE CELPSLSRPL 
YECILTGVPP IDSGIVHNNI NRLSNQRSVF HYAREANLGT AAAAYHWMSE LYNRSPFDPQ
RDRHTHAPKL PIQHGLFYWD DRYPDSHLLA DGEYLRRRHA PNFLLVHPMS VDDVGHRHGL
DSSQYRNAAR SVDILLADYL PGWLEEGYQV LVTADHGMNN DRSHNGLLAE EREVPLFVFG
DAFSLDPAAK PLQTELCGTI CELLGAAHDK TVCRELLK