Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1725 |
Symbol | |
ID | 1043452 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 1924862 |
End bp | 1925698 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637145129 |
Product | type I phosphodiesterase/nucleotide pyrophosphatase |
Protein accession | NP_743882 |
Protein GI | 26988457 |
COG category | [R] General function prediction only |
COG ID | [COG1524] Uncharacterized proteins of the AP superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0109136 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCAACGC GGTTCATGAC TGGAGAAAAC ATGCAACACA ACGTCATCCT GGTCCTGCTC GACGGCCTCA ACTATCAGGT CGCCCACCAT GCGATGGGCC ACCTGCACGC CTACGTCGAG GCCGACCGCG CCGCGCTGTA CCGCGTGGAA TGCGAGCTGC CATCGCTGTC GCGGCCGCTG TACGAATGCA TCCTCACCGG CGTGCCACCG ATCGACAGCG GCATCGTGCA CAACAACATC AACCGCCTGT CCAACCAACG CAGCGTGTTT CACTACGCCC GCGAGGCCAA CCTGGGCACT GCAGCGGCGG CTTATCACTG GATGAGCGAG CTGTACAACC GCTCGCCCTT CGACCCGCAG CGTGACCGCC ACACCCACGC GCCGAAGCTG CCGATCCAGC ACGGGCTGTT CTACTGGGAC GACCGTTACC CCGATTCGCA CCTTCTGGCC GATGGCGAGT ACCTGCGCCG CCGTCACGCG CCCAACTTCC TGCTGGTGCA CCCGATGAGC GTTGACGACG TGGGCCACCG CCACGGCCTG GACAGCAGCC AGTATCGCAA CGCTGCGCGC AGCGTCGACA TCCTGCTGGC CGACTACCTG CCCGGCTGGC TCGAAGAGGG CTACCAGGTA TTGGTCACCG CCGACCACGG CATGAACAAC GACCGCTCGC ACAACGGCCT GCTGGCGGAA GAACGTGAAG TGCCGCTGTT CGTCTTCGGC GATGCCTTCA GCCTGGACCC GGCCGCCAAA CCGCTGCAAA CCGAACTGTG CGGCACCATC TGCGAGCTGC TGGGTGCCGC GCACGACAAG ACGGTTTGCC GGGAGCTGCT GAAGTGA
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Protein sequence | MPTRFMTGEN MQHNVILVLL DGLNYQVAHH AMGHLHAYVE ADRAALYRVE CELPSLSRPL YECILTGVPP IDSGIVHNNI NRLSNQRSVF HYAREANLGT AAAAYHWMSE LYNRSPFDPQ RDRHTHAPKL PIQHGLFYWD DRYPDSHLLA DGEYLRRRHA PNFLLVHPMS VDDVGHRHGL DSSQYRNAAR SVDILLADYL PGWLEEGYQV LVTADHGMNN DRSHNGLLAE EREVPLFVFG DAFSLDPAAK PLQTELCGTI CELLGAAHDK TVCRELLK
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