| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1720 |
|---|
| Symbol | |
|---|
| ID | 1043458 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 1920560 |
|---|
| End bp | 1921522 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637145124 |
|---|
| Product | alcohol dehydrogenase, zinc-containing |
|---|
| Protein accession | NP_743877 |
|---|
| Protein GI | 26988452 |
|---|
| COG category | [C] Energy production and conversion
[R] General function prediction only |
|---|
| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
|---|
| TIGRFAM ID | [TIGR02824] putative NAD(P)H quinone oxidoreductase, PIG3 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.161513 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.103603 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGGCAT TGCAAGGCGT TGACGGACAT GTGGAGTGGG TCGAGGCCGA ACGCCCGACC
TGTGACGCGG GCCAAGTGCG CATTCGCGTG GCCGCTGCGG GGCTGAACCG CGCCGACCTG
CTGCAGATGA AAGGTTTGTA CCCGCCACCA CCAGGTGCCA GCCCATACAT GGGGCTGGAG
TGTTCCGGGG TGGTTGAAGA GGTGGGGGCT GGTGCCGCCT GGCGCGTGGG TGACCGCGTT
TGCGCCCTGC TGGCCAGCGG CGCCATGGCC GAGGAAGTGG TGGTCGATGC CCGTCACGTA
TTGCCGGTAC CCGAAGGCCT TGGCCTGCAT GAGGCGGCAG CGTTGCCGGA GGTGTATGCC
ACCGCCTGGC TGAACATCTT CCAGCTCGGT GCAGTGAAGG CTGGCGAGAA GGTGCTGGTG
CACGCCGGCG CCAGTGGCGT TGGCTCGGCC GCCATCCAGC TGTGCAAGGC GTTCGGCAGC
CCGGTATGGG TCAGCGTCGG TTCGCAGGAC CGCTTGGCCT ACTGCCAGGC GCTGGGCGCT
GCGGGTGGTG TGGTACGTAA CGAGAACCTG GACGCGCTGG AAGGTTTTGG CCCGTTCGAT
GTGATTCTCG ACCCGGTGGG CGCCAGCTAC GGTGAGCTGA ACCTCAAGCT GCTGGCCCGT
GACGGGCGCT GGGTGATCAT CGGCCTGATG GGCGGACGCA AGTTCGAGCT GGACCTGGCC
CAAGTGCTGG GCAAGCGTCT GGAAATTACC GGTTCCACCC TGCGCAACCG TGATGACGGC
TTCAAGGCCG AGCTGTTGCG CGAACTGCAG CAGCAAGTAT GGCCGCTGTT CGCCGAGGGG
CGGTTGTCGC CGCAGCTGGT CGACACCTAT CCGGTGGAGT TTGCCCAGGC GGCGTATGCC
GAGCTGGAGA CCAACCAGGT GTCGGGCAAG CTGGTGATGG TGATCGACCC TAGCCTGGTG
TAA
|
|---|
| Protein sequence | MKALQGVDGH VEWVEAERPT CDAGQVRIRV AAAGLNRADL LQMKGLYPPP PGASPYMGLE
CSGVVEEVGA GAAWRVGDRV CALLASGAMA EEVVVDARHV LPVPEGLGLH EAAALPEVYA
TAWLNIFQLG AVKAGEKVLV HAGASGVGSA AIQLCKAFGS PVWVSVGSQD RLAYCQALGA
AGGVVRNENL DALEGFGPFD VILDPVGASY GELNLKLLAR DGRWVIIGLM GGRKFELDLA
QVLGKRLEIT GSTLRNRDDG FKAELLRELQ QQVWPLFAEG RLSPQLVDTY PVEFAQAAYA
ELETNQVSGK LVMVIDPSLV
|
|---|
| |