Gene PP_1716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1716 
Symbol 
ID1043470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1916410 
End bp1916748 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content66% 
IMG OID637145120 
ProductCro/CI family transcriptional regulator 
Protein accessionNP_743873 
Protein GI26988448 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000130124 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0231665 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTATTC AGGTCATCAG CCGGGACGGT CAACCCGAGT ACGCCGTAGT TCCCTGGGAG 
CAATACCAGG CGTTGCTCAG CGCTGCAGGG CAGGCACCAG CCGAGGCGGT TTCCAGTGAG
GCGCAGGGCG TTGCTGCCAG TGCCCCTCTG CCAGCCTTCA GCGAAGTCGC CCAGATTCGC
CAGGCCAAGG GCATTGCCCC GGAGCAACTG GCGCGCAATG TCGGGGTGAG CCCGGCGTAT
CTGGCCATGA TCGAATCGGG TGAACGCCAG CCAGATGCTG CCATCCGCCG CGCCCTGGCC
TGGCATCTGG GGGTGGCTGG CTGGAGCGAG CCATCATGA
 
Protein sequence
MGIQVISRDG QPEYAVVPWE QYQALLSAAG QAPAEAVSSE AQGVAASAPL PAFSEVAQIR 
QAKGIAPEQL ARNVGVSPAY LAMIESGERQ PDAAIRRALA WHLGVAGWSE PS