Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1707 |
Symbol | |
ID | 1043609 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 1906785 |
End bp | 1907735 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637145111 |
Product | D-isomer specific 2-hydroxyacid dehydrogenase family protein |
Protein accession | NP_743864 |
Protein GI | 26988439 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0229482 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0889103 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCAG AAGTCCTGCA ACTGAGCCCT ATCCTGATCC CGCAGATCCG TGAGCGCCTG GAACAGCTGT TCACCGTACA CCGCTACTAC GAACAGGCCG ACAAGGAGGC CTACGTCAGC CAGCATGCTG GCAATATTCG CGGCGTGATC ACCGGCGGCC ACACCGGCAT CAGCCAGGCG CTGATGGCGC GCCTGCCCAA CCTCGAAGTG ATCGCCGTCA ATGGCGTCGG CACCGACGCG GTAGACCTGG CCTATGCCCG TGATCGCGGC ATCCAGGTGA CGGCGACCAT CGGTGCGCTC ACCGAGGACG TCGCCGATCT TGCCATCGGC CTGCTGATCG GCTTGTGCCG GGGGATCTGC ACCGGTGACC GCTTCGTTCG CGCCGGCCGT TGGGCCACCA GCACCACGCC GCTGGCACCG CTGCCACTGG CCCGGCAGGT GTCGGGCATG CGCGTGGGCA TCGTCGGCAT GGGCCGGGTC GGGCGGGCGG TAGCACAGCG GGCGGCAGCC TTCGGTTGCC CGATCCGCTA CACCGATCTA CAGGCACTGG ATGTGCCCTA CGGGTTCGAG GCAGATCTGC TGCAGTTGGC CAAGGACAGC GATGCGCTGA TCCTCGCAGC GGCGGCTGAC AAGGGCGAGG CGCTGATCAA TCGCGACGTG CTTCAGGCGT TGGGCAGCGA GGGGTACCTG ATCAACATCG CACGCGGCAA GCTGGTAGAT GAGCCTGCGT TGATCGCCGC GCTGCAGGCT GGCGAGATCG GTGGCGCGGC GCTGGATGTG TTTGCCGATG AACCGCGAGC GCCCGAGGCG TTGTTCGAGC GCGAAGATGT AGTCCTGCAA CCGCATCGCG CCAGTGCCAC TGTACAGACA CGCACGCGCA TGGGCGAGAT GGTGGTGGCC AGCCTGGTGG ATGTGTTTGC CGGGCGCACG CCGCAGGGGT TGGTTATCTA G
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Protein sequence | MKPEVLQLSP ILIPQIRERL EQLFTVHRYY EQADKEAYVS QHAGNIRGVI TGGHTGISQA LMARLPNLEV IAVNGVGTDA VDLAYARDRG IQVTATIGAL TEDVADLAIG LLIGLCRGIC TGDRFVRAGR WATSTTPLAP LPLARQVSGM RVGIVGMGRV GRAVAQRAAA FGCPIRYTDL QALDVPYGFE ADLLQLAKDS DALILAAAAD KGEALINRDV LQALGSEGYL INIARGKLVD EPALIAALQA GEIGGAALDV FADEPRAPEA LFEREDVVLQ PHRASATVQT RTRMGEMVVA SLVDVFAGRT PQGLVI
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