Gene PP_1707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1707 
Symbol 
ID1043609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1906785 
End bp1907735 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content66% 
IMG OID637145111 
ProductD-isomer specific 2-hydroxyacid dehydrogenase family protein 
Protein accessionNP_743864 
Protein GI26988439 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1052] Lactate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0229482 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0889103 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCAG AAGTCCTGCA ACTGAGCCCT ATCCTGATCC CGCAGATCCG TGAGCGCCTG 
GAACAGCTGT TCACCGTACA CCGCTACTAC GAACAGGCCG ACAAGGAGGC CTACGTCAGC
CAGCATGCTG GCAATATTCG CGGCGTGATC ACCGGCGGCC ACACCGGCAT CAGCCAGGCG
CTGATGGCGC GCCTGCCCAA CCTCGAAGTG ATCGCCGTCA ATGGCGTCGG CACCGACGCG
GTAGACCTGG CCTATGCCCG TGATCGCGGC ATCCAGGTGA CGGCGACCAT CGGTGCGCTC
ACCGAGGACG TCGCCGATCT TGCCATCGGC CTGCTGATCG GCTTGTGCCG GGGGATCTGC
ACCGGTGACC GCTTCGTTCG CGCCGGCCGT TGGGCCACCA GCACCACGCC GCTGGCACCG
CTGCCACTGG CCCGGCAGGT GTCGGGCATG CGCGTGGGCA TCGTCGGCAT GGGCCGGGTC
GGGCGGGCGG TAGCACAGCG GGCGGCAGCC TTCGGTTGCC CGATCCGCTA CACCGATCTA
CAGGCACTGG ATGTGCCCTA CGGGTTCGAG GCAGATCTGC TGCAGTTGGC CAAGGACAGC
GATGCGCTGA TCCTCGCAGC GGCGGCTGAC AAGGGCGAGG CGCTGATCAA TCGCGACGTG
CTTCAGGCGT TGGGCAGCGA GGGGTACCTG ATCAACATCG CACGCGGCAA GCTGGTAGAT
GAGCCTGCGT TGATCGCCGC GCTGCAGGCT GGCGAGATCG GTGGCGCGGC GCTGGATGTG
TTTGCCGATG AACCGCGAGC GCCCGAGGCG TTGTTCGAGC GCGAAGATGT AGTCCTGCAA
CCGCATCGCG CCAGTGCCAC TGTACAGACA CGCACGCGCA TGGGCGAGAT GGTGGTGGCC
AGCCTGGTGG ATGTGTTTGC CGGGCGCACG CCGCAGGGGT TGGTTATCTA G
 
Protein sequence
MKPEVLQLSP ILIPQIRERL EQLFTVHRYY EQADKEAYVS QHAGNIRGVI TGGHTGISQA 
LMARLPNLEV IAVNGVGTDA VDLAYARDRG IQVTATIGAL TEDVADLAIG LLIGLCRGIC
TGDRFVRAGR WATSTTPLAP LPLARQVSGM RVGIVGMGRV GRAVAQRAAA FGCPIRYTDL
QALDVPYGFE ADLLQLAKDS DALILAAAAD KGEALINRDV LQALGSEGYL INIARGKLVD
EPALIAALQA GEIGGAALDV FADEPRAPEA LFEREDVVLQ PHRASATVQT RTRMGEMVVA
SLVDVFAGRT PQGLVI