Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1697 |
Symbol | |
ID | 1043663 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 1891561 |
End bp | 1892487 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637145097 |
Product | GntR family transcriptional regulator |
Protein accession | NP_743854 |
Protein GI | 26988429 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.394486 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGCGA GCATTGCCAC GTCCTTGTTG TGCGGGTTTG CCGAGCACAA GCATAAGCCA CATGCGGTCC TCCCGACACA AGGCTGTTTC GCCTACCAAA GGGCGACAGG CGGAGGATTG ACAGCCTGTC AGGCTCAGGG AATACTCTCG AAAAATTCAT ATATATGTTT ATATAACAAG ACGAGAGCGA GACCCATGCA CCCATTGACC GGTGATGCTC GACTGCCCCG CTACCAACAA CTGCGCGATC ACATGGTTGC GCAAATTGCC AACAACCGCT GGCGCCCGGG GGAAGCGATC CCGACCGAGG CAGCCTTGGC CACCGAGTTC GACCTGTCGA TCGGTACCGT GCGCAAGGCC GTCGATGTCC TGGTGGCCGA AGGCGTGCTG GAGCGCCAGC AGGGCCGCGG CACCTTCATT CGCCGCCCAC AGTTCCAGTC GTCGCTGTTC CGCTTCTTCC GTTTCGAGGC CGCCAATGGC GAGCGCATAG TGCCGGAAAG CCGCATTCTC TCCATCGAGT CGCTGCCGGC GCCTTCCGCG GTGGCCGAGG CATTGGGCCT GGCAGGGGAG GCAGAAGTGA TCCGCATCAT TCGCACACGT CTGCTCGGCG CCCAGCCGGT GCTGGCCGAA GAAATCTGGC TGCCGCGCCA AACCTTCCAG CCGCTGCTGG ACGTGGATCT GAACAGCGAG GGCCCGCTGC TGTACCCGAT CTACGAAGCG CTGTGCGGTC AGGTGGTCGC CTACGCCGAA GAAACCCTGA CCGCCGAAGC GGTCGACGCG GTGCATGGCC GCTTGCTGCA ACTGCCGGCC GACAGCCCGG TGGTCGTGAT CGAGCGCCTG GCCCGCGATT ACGCCGGCAA ACCTCTGGAA TGGCGCCGCT CGCGCGGCCA TGCGCAGCAC TTCCGCTACC GCATCGACAT TCGTTAA
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Protein sequence | MAASIATSLL CGFAEHKHKP HAVLPTQGCF AYQRATGGGL TACQAQGILS KNSYICLYNK TRARPMHPLT GDARLPRYQQ LRDHMVAQIA NNRWRPGEAI PTEAALATEF DLSIGTVRKA VDVLVAEGVL ERQQGRGTFI RRPQFQSSLF RFFRFEAANG ERIVPESRIL SIESLPAPSA VAEALGLAGE AEVIRIIRTR LLGAQPVLAE EIWLPRQTFQ PLLDVDLNSE GPLLYPIYEA LCGQVVAYAE ETLTAEAVDA VHGRLLQLPA DSPVVVIERL ARDYAGKPLE WRRSRGHAQH FRYRIDIR
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