Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1695 |
Symbol | |
ID | 1043697 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 1886790 |
End bp | 1890269 |
Gene Length | 3480 bp |
Protein Length | 1159 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637145095 |
Product | integral membrane sensor hybrid histidine kinase |
Protein accession | NP_743852 |
Protein GI | 26988427 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only [T] Signal transduction mechanisms |
COG ID | [COG0591] Na+/proline symporter [COG0642] Signal transduction histidine kinase [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.948496 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.574545 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTTGT CCAGCGGGCT GATCGCCGTG GTCGCCCTGG CCTATATGGC CATCATGTTC GCCATCGCCT TCTATGGCGA CCGCCGCAGC ACGCCATTGC CGCCAAAGCT GCGTGCCTGG GTGTACAGCC TGTCGCTGGC CGTGTACTGC ACCAGCTGGA CCTTCTTCGG CGCGGTCGGC CAGGCCGCCG AACAGCTTTG GGCGTTCCTG CCCATCTACC TGGGCCCGGT ACTGCTGCTG ATCTTCGCCC CTTGGGTGCT GCAGAAGATG GTGCTGATCA GCAAGCAGCA GAACATCACC TCGATCGCCG ACTTCATTGC CGCGCGCTAC GGCAAGTCGC AGACCCTGGC AGTGGTGGTG GCACTGATCT GCCTGGTCGG TGTGCTGCCG TACATCGCCT TGCAGCTCAA GGGCATCGTA CTGGGCGTGA ACCTGCTGAT CGGCGCCAAC GCCGACGCCA CCGGCACCCG CGTGCAGGAC ACCGCGCTGG TGATATCGCT GGTACTGGCG CTGTTCGCCA TCGTCTTCGG TACCCGCAGC CTGGATGTGA CCGAGCACCA CCGCGGCATG GTCCTGGCGA TCGCCTTCGA ATCGCTGATC AAGTTGCTGG CGTTCCTTGC CGTGGGCATC TTCATCGTTT TCAACCTGTT TGACGGTTTC GACGACCTGT TCAGCCAGGC CCGCCAGTCG ATCCACTTGC AGGACTATTG GAAAGAAACC ATCAATTGGC CTTCCATGGT GGTGCAAACC GCCGTGGCGA TGATGGCAAT CATCTGCCTG CCCCGACAGT TCCACGTTAC CGTGGTGGAG AACATCGAAC CGCAGGACTT GCGCCTGGCG CGCTGGGTAT TCCCGATGTA CCTGGCACTG GCCGCGCTGT TCGTGGTGCC GATTGCCCTG GCCGGGCAGA TGCTGCTGCC CGGCACGGTG ATCTCCGACT CGTTCGTCAT CAGCCTGCCC CTGGCCGAGG CGCACCCGAG CCTTGCCCTG CTGGCGTTCA TCGGCGGTGC CTCGGCGGCT ACCGGCATGG TGATCGTCGA GGCCGTGGCG TTGTCGACCA TGGTGTCCAA CGACATGCTG CTGCCCTGGC TGCTGCGCCG CAACAACGCC GAGCGGCCTT TCGAAGCGTT CCGCCACTGG ATGCTTTCGG TACGCCGGGT AACCATCGTG GTGATCCTGC TGCTGGCCTA TGTCAGCTAC CGCCTGCTGG GTTCCACCGC CAGCCTGGCG ACCATCGGCC AGATTGCCTT TGCCGCTGTG ACCCAGCTCA CCCCAGCCAT GCTTGGCGCG CTGTACTGGA AGCAGGCCAA CCGTCGCGGT GTGTTCGCCG GCCTGGCCGC TGGCATTTTC CTGTGGTTCT ACACCTTGGT GCTGCCGATT GCCGCGCACA GCCTGGGCTG GTCGTTGCAG TTGTTCCCTG GCCTGGCGTG GCTGCACGGC AACCCGCTGA ACCTGCCGAT CAGTCCACTG ACCCAAGGTG TGGTGCTGTC ACTGGCGGGC AACTTCACCC TGTTCGCCTG GGTTTCGGTG CTGTCGCGCA CGCGGGTTTC CGAGCACTGG CAGGCCGGCC GGTTCATTGG CCAGCAGACC AGCGCGCGGC CCAGCAGCAA GCCGCTGCTG GCGGTGCAGA TCGACGACCT GCTGACCCTG GCCTCGCGCT TTGTCGGGGA AGAGCGCGCA CGGCAGAGCT TCATCCGCTT TGCCTACCGC CAGGGCAAGG GTTTCAACCC TAACCAGAAC GCCGATGGCG ACTGGATCGA GCACACCGAG CGCCTGCTGG CCGGGGTGCT CGGTACCTCG TCGACCCGCG CGGTGGTCAA GGCGGCCATC GAAGGCCGCG ACATGCAACT GGAAGACGTG GTGCGCATCG CTGACGAAGC CAGTGAGGTG CTGCAGTTCA ACCGCGCCCT GCTGCAAGGC GCCATCGAGA ACATCAACCA AGGCATCAGC GTGGTCGACC AGAACCTGCA CCTGGTGGCC TGGAACCGCC GCTACCTGGA ACTGTTCAAC TACCCGGACG GACTGATCAG CGTTGGGCGA CCGATTGCCG ACATCATCCG CTACAACGCC GAGCGCGGCC TGTGCGGCCC CGGCGAGGCA CAGGTGCATG TGGCGCGGCG GCTGCACTGG ATGCGCCAGG GCCGCGCGCA CTCCTCCGAG CGGCTGTTCC CCAATGGCCG GGTGATCGAG CTGATCGGCA ACCCGATGCC GGGCGGTGGC TTTGTCATGA GCTTCACCGA CATCACCCCG TTCCGCGAGG CCGAGCAGGC CCTGCGCGAT GCCAACGAAC GCCTTGAGCA ACGCGTGGCG GAGCGCACCC ACGAACTGTC GCAGTTGAAC CAGGCGCTGT CCGAAGCCAA GAGCCAGGCC GAAGCGGTGA GCAACTCCAA GACCCGCTTC CTGGCCGCCG TCAGCCATGA CCTGATGCAA CCGTTGAACG CCGCACGGCT TTTCTCTGCC GCCTTGTCGC AACAGGCCGA GGGCATGAAC GAAGAGGCCC GGCAGTTGGT ACAGCACATG GACAGCTCGC TGCGCTCGGC TGAAGAGCTG ATCAGCGACC TGTTGGACAT CTCGCGCCTG GAAAACGGCA AGATCACCCC GGATGCCAAA CCCTTCGCCC TCAACGAACT GTTCGACACC CTGGGCGCCG AGTTCAAGCT GCTGGCGGCC GAGAAAGGCC TGGAGTTCCG CCTGCGCGGC AGCCGCCTGC GGGTGGACAG CGACATGAAA CTGCTACGCC GGGTGCTGCA GAACTTCCTC ACCAATGCCC TGCGCTACGG CAAGAGCCCG ATCCTGCTGG GCGCGCGCCG ACAGGGCGAG CGCCTGTGGC TGGAGGTCTG GGACCGTGGC CCGGGCATTG CTGACGACAA GCTGCAAGTG ATCTTTCAGG AGTTCAAGCG CCTGGACAGC CACCAGACCC GTGCCGAGAA GGGGCTAGGC TTGGGCCTGG CCATTGCAGA CGGTCTGTGT CGGGTGCTGG GGCATCCGCT GGAAGTGCGC TCATGGCCAG GCAAGGGCAC GGTGTTCCGC GTCAGCGTAC CGATTGCACG CCAGGCCGCC GCGGCGCCAA GCACGCCCGT GGAACAACAG GGCGGCCAGC CACTGGCCGG GCTGCAAGTG CTATGCGTGG ACAACGAAGA CAGCATCCTG ATCGGCATGA ACAGCCTGCT GAGCCGCTGG GGTTGCCAGG TATGGACCGC GCGCAACCAG GCCGAATGCG AAGCCCTGCT GGCCAAAGGC ATGCGCCCGC ACCTGGCATT GGTGGACTAC CACCTGGACG ACGGCGAGAC CGGCACCGGG CTGATGGGCT GGCTTCGAGC ACGGCTGGGT GAGCCGGTAC CCGGTGTAGT GATCAGCGCC GACGGCAGCA AGGAAACCAT CGCCCTGGTA CATGCATCAG GGCTGGACTA CCTGGCCAAA CCGGTCAAGC CTGCGGCCTT GCGCGCCCTG CTCAATCGCC ATCTGAGCCT GGCTCAGTAA
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Protein sequence | MSLSSGLIAV VALAYMAIMF AIAFYGDRRS TPLPPKLRAW VYSLSLAVYC TSWTFFGAVG QAAEQLWAFL PIYLGPVLLL IFAPWVLQKM VLISKQQNIT SIADFIAARY GKSQTLAVVV ALICLVGVLP YIALQLKGIV LGVNLLIGAN ADATGTRVQD TALVISLVLA LFAIVFGTRS LDVTEHHRGM VLAIAFESLI KLLAFLAVGI FIVFNLFDGF DDLFSQARQS IHLQDYWKET INWPSMVVQT AVAMMAIICL PRQFHVTVVE NIEPQDLRLA RWVFPMYLAL AALFVVPIAL AGQMLLPGTV ISDSFVISLP LAEAHPSLAL LAFIGGASAA TGMVIVEAVA LSTMVSNDML LPWLLRRNNA ERPFEAFRHW MLSVRRVTIV VILLLAYVSY RLLGSTASLA TIGQIAFAAV TQLTPAMLGA LYWKQANRRG VFAGLAAGIF LWFYTLVLPI AAHSLGWSLQ LFPGLAWLHG NPLNLPISPL TQGVVLSLAG NFTLFAWVSV LSRTRVSEHW QAGRFIGQQT SARPSSKPLL AVQIDDLLTL ASRFVGEERA RQSFIRFAYR QGKGFNPNQN ADGDWIEHTE RLLAGVLGTS STRAVVKAAI EGRDMQLEDV VRIADEASEV LQFNRALLQG AIENINQGIS VVDQNLHLVA WNRRYLELFN YPDGLISVGR PIADIIRYNA ERGLCGPGEA QVHVARRLHW MRQGRAHSSE RLFPNGRVIE LIGNPMPGGG FVMSFTDITP FREAEQALRD ANERLEQRVA ERTHELSQLN QALSEAKSQA EAVSNSKTRF LAAVSHDLMQ PLNAARLFSA ALSQQAEGMN EEARQLVQHM DSSLRSAEEL ISDLLDISRL ENGKITPDAK PFALNELFDT LGAEFKLLAA EKGLEFRLRG SRLRVDSDMK LLRRVLQNFL TNALRYGKSP ILLGARRQGE RLWLEVWDRG PGIADDKLQV IFQEFKRLDS HQTRAEKGLG LGLAIADGLC RVLGHPLEVR SWPGKGTVFR VSVPIARQAA AAPSTPVEQQ GGQPLAGLQV LCVDNEDSIL IGMNSLLSRW GCQVWTARNQ AECEALLAKG MRPHLALVDY HLDDGETGTG LMGWLRARLG EPVPGVVISA DGSKETIALV HASGLDYLAK PVKPAALRAL LNRHLSLAQ
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