Gene PP_1683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1683 
Symbol 
ID1043874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1877426 
End bp1877830 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content66% 
IMG OID637145083 
ProductMarR family transcriptional regulator 
Protein accessionNP_743840 
Protein GI26988415 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.857494 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACCA GTGAATGCAT CTGTACCCAC CTGCGTCGCG CCGCCCGCGG CGTGAGCCGG 
CATTACGACG AAGCCCTTGC CGGCTTCGGG GTCAATGTCG CCCAGTTTTC CCTGCTGCGG
CACCTGCAGC GGCTCGACCG ACCCAGCATC ACAACCCTGG CCGAAGCCAT GGGGCTCGAG
CGCAGTACCC TGGGCCGCAA CCTGCGTGTG CTGGAGGCGG ATGGGCTGGT AGCACTGGGC
GAGGGCGACG ACCAGCGTAA CCGCGTGGTG CTGTTGACCG CGGCGGGTAA GCAACTTTTG
CACGTTGCCC ACCCGGCCTG GGAGCAGGCC CAGAAAGAGC TGGTTGAACG GCTCGGGGTG
GGGCAGCGGG ATGAACTGGT GCGACTGCTG GAACAACTGG CCTGA
 
Protein sequence
MLTSECICTH LRRAARGVSR HYDEALAGFG VNVAQFSLLR HLQRLDRPSI TTLAEAMGLE 
RSTLGRNLRV LEADGLVALG EGDDQRNRVV LLTAAGKQLL HVAHPAWEQA QKELVERLGV
GQRDELVRLL EQLA