Gene PP_1682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1682 
Symbol 
ID1043896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1876059 
End bp1877363 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content63% 
IMG OID637145082 
Productglycosy hydrolase family protein 
Protein accessionNP_743839 
Protein GI26988414 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.934652 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTTTCGC AGCAGGCCAT ACGGGGGGAG GGGGCCAGTA ACTTCCAGAA ACGGTCCGGT 
AGCGCCTGCC TCTTGCTTGT CGGCGTATCC TCAGCCTCCC CCCAGCAACC AGGTAGGCTT
CCCGTGCGTC ACTGGATCTT TGCCAGTCTA TTGGTCCTGT CCACCCTCCC AGCCACTGCT
GCAGATCTCA TGGCGTTCTG GGACACCCCA CGCCACGGCG GCAACAGCTT CAACCGGCTG
CCACCCGATC AAGCCTACTT CGATGCCCTG AGGGGGTACG GCGCCACATG GGTGCGGCTG
TCGTACGACA AATGGCATCC GGTGAAACGT GATTTCCTCC TTGGCAGCGC CGATACCTAT
GAAGGCCTGT CCGACGCCGA CCTGGCGGTG CTGCGTGCCA CCCTCGACCG GGCGCACCAG
GCGGGGCTCA AGGTGGTCAT CGCGCCACTC TCGCTACCGG GTATGCGCTG GTCGCAAAAC
AACCAGGGCC AGTTCGATGA TCGCCTGTGG CAAGACAAAC GCTACTGGTC CCAGGCTGCG
GCGTTCTGGC GAGATATGGC GCGCGAACTG AAAAGTCATC CGGCCATCGC GGCCTACAAC
CTGATCAATG AGCCAGCACC GGAGAAACAG GGTGGCCTGG CTGAACATGC CGAACTCGGG
CAGATGCAGC AGTGGTATGC GCAAGCGCAG GGCGGTGCGC GCGATCTGCC CTTGCTGTAC
CGGCAACTGA TAGCGGCCAT CCGCGAAGAA GACGCTGATA CGCCGATCAT GGTCGATGCC
GGCTGGTATG CAGGCGCAGA CGCGTTCGGC TACTGGCCGG CGCCGCTGGA AGACCCGCGA
GTGCTGTACA GCGTGCACAT GTATGAGCCC TATGCCGCAA CCAGTGCGCC GAACATGGCG
CGCAAACAGC CCATCGCCTA TCCAGGCCCC GTATCTTTTG CCGGGCAGAC ACAGCTGTGG
GATGGGCGGC GAGTTGAAGG CTACTTGCGC CAGCCGCTGG CATGGGCCGA GGCCATGGGG
CTGCCGCTTT CTCGTCTGGT GGTGGGCGAG TTTGGCTGCA TGCGCAGGCT GCCGGGTTGT
CGGCAGTACC TTGAAGATGT ACTCGTCGTG CTGGATCGCA ACCGGTTGCA CTGGGCATTC
TATAGCTTCC GTGAAGACAA CTGGGATGGC ATGGACTACG AACTGGGCAC GGCGAAGGTG
CCGTGGCGCT ACTGGCAAGC GGTCGAGCAG GGCGCGCCGG ACCCCTTGGC GCGCAAGGCG
ACGGTTGAGT TCGAGCCGAT CCGCAGGCGC TTGAACCCGG ACTGA
 
Protein sequence
MLSQQAIRGE GASNFQKRSG SACLLLVGVS SASPQQPGRL PVRHWIFASL LVLSTLPATA 
ADLMAFWDTP RHGGNSFNRL PPDQAYFDAL RGYGATWVRL SYDKWHPVKR DFLLGSADTY
EGLSDADLAV LRATLDRAHQ AGLKVVIAPL SLPGMRWSQN NQGQFDDRLW QDKRYWSQAA
AFWRDMAREL KSHPAIAAYN LINEPAPEKQ GGLAEHAELG QMQQWYAQAQ GGARDLPLLY
RQLIAAIREE DADTPIMVDA GWYAGADAFG YWPAPLEDPR VLYSVHMYEP YAATSAPNMA
RKQPIAYPGP VSFAGQTQLW DGRRVEGYLR QPLAWAEAMG LPLSRLVVGE FGCMRRLPGC
RQYLEDVLVV LDRNRLHWAF YSFREDNWDG MDYELGTAKV PWRYWQAVEQ GAPDPLARKA
TVEFEPIRRR LNPD