Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1673 |
Symbol | cobB |
ID | 1044181 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 1867883 |
End bp | 1869178 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637145073 |
Product | cobyrinic acid a,c-diamide synthase |
Protein accession | NP_743830 |
Protein GI | 26988405 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1797] Cobyrinic acid a,c-diamide synthase |
TIGRFAM ID | [TIGR00379] cobyrinic acid a,c-diamide synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.637615 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGTCGAT CGCGCCACTG CCCCGCCGTG TTGATCGCGG CGCCGGCCTC TGGCCAGGGC AAGACTACCG TCACTGCTGC GCTGGCCCGC CTGCACCGCA ACCTCGGGCG CAAGGTGCGG GTGTTCAAAT GCGGGCCCGA CTTTCTTGAC CCGATGATTC TCGAACGGGC CAGTGGCGCG CCGGTGTATC AGCTGGACCT GTGGATGATC GGTGCCGAGG AAAGCCGTCG TCTGCTGTGG GAAGCTGCTG GCGAGGCTGA CCTGATCCTC ATCGAAGGGG TGATGGGGCT GTTCGACGGT ACCCCGTCAA GCGCCGACCT GGCACGCCAC TTTGGCGTGC CGGTGCTGGC GGTGATCGAC GGCACAGCCA TGGCCCAGAC CTTCGGCGCC CTGGCCCTGG GCCTGGCGCG GTACCAGGCC GATCTGCCGT TCGCCGGCGT GCTGGCCAAT CGGGTAGGCA GCCTGCGTCA TGCGCAACTG CTCGAAGGCA GCCTGACCGA GGGCTTGCGC TGGTATGGCG GCTTGTCCCG CGAGCGCGGC ATCGAGCTGC CCAGCCGCCA CCTGGGCCTG GTGCAGGCCA GCGAGCTGAA TGACCTGGAC ACCCGCCTGG ACGCCGCCGC CGAAGCGCTG GGCGCCAGTT GCGATGCGGC GTTGCCGCCG CCAGTCAGCT TTGCCGAGCC GGAACCGCAA GCCTGCGTTG CCTCGCTGGC CGGTGTGCGC ATAGGCGTTG CGCGGGACGA GGCGTTCGCC TTCATCTATG GCGCTAACCT CGACCTGTTG CGCAACCTGG GTGCCCAGCT GGTGTTCTTC TCGCCGCTGC ACGACCACGA ACTGCCGGCG GTAGACAGCC TGTATCTGCC GGGTGGATAT CCTGAGCTGC ATCACCATGC GCTGGCCGCC AACGCACCGA TGTGCGAGGC GATCCGCGCC CACCACGCGC AGGGCAAGCC ATTGCTGGCC GAGTGCGGCG GCATGCTGTA CCTGCTCGAT GCCCTGACTG ACGTGGCCGG CGAACGTGCC GAACTGCTCG GCCTGCTGCC GGGTGAGGCG ACCATGCAGA AGCGCCTGGC TGCCCTGGCG CTGCAGGCGG TGGAGCTGCC GGAGGGGACA TTGCGCGGTC ACACCTATCA CCATTCGCTG ACCAGCACTG CGCTGGAACC GATTGCCCGG GGCCTGAGCC CCAACGGCGG GCGTGGCAAC GAGGCGGTTT ATCGTCTGGG CCGGCTGACG GCCTCTTACG TGCACTTCTA TTTCCCTTCC TGCCCGGATG CGGCGGCGGC GCTGTTGCGA CCATGA
|
Protein sequence | MSRSRHCPAV LIAAPASGQG KTTVTAALAR LHRNLGRKVR VFKCGPDFLD PMILERASGA PVYQLDLWMI GAEESRRLLW EAAGEADLIL IEGVMGLFDG TPSSADLARH FGVPVLAVID GTAMAQTFGA LALGLARYQA DLPFAGVLAN RVGSLRHAQL LEGSLTEGLR WYGGLSRERG IELPSRHLGL VQASELNDLD TRLDAAAEAL GASCDAALPP PVSFAEPEPQ ACVASLAGVR IGVARDEAFA FIYGANLDLL RNLGAQLVFF SPLHDHELPA VDSLYLPGGY PELHHHALAA NAPMCEAIRA HHAQGKPLLA ECGGMLYLLD ALTDVAGERA ELLGLLPGEA TMQKRLAALA LQAVELPEGT LRGHTYHHSL TSTALEPIAR GLSPNGGRGN EAVYRLGRLT ASYVHFYFPS CPDAAAALLR P
|
| |