Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1670 |
Symbol | |
ID | 1044207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 1866279 |
End bp | 1866812 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637145070 |
Product | NLP/P60 protein |
Protein accession | NP_743827 |
Protein GI | 26988402 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAAAGA TGGCGCGCTT CGCATTTCTC TCCTTGGCAG CCTTGCTGGC TGCATGCTCC AGCCGTGCGC CTGCGCCGGC CCCTGTGGTA CAGCCGCAGG TTACCTATAG CCAGCCCAGT CCTTCACCGA TTGCCGATGA CGTGCTGATT CGCGCCATTG GTCTGGTTGG CACGCCCTAT CGTTGGGGGG GCAATACCCC GGACTCCGGC TTCGATTGCA GCGGCCTGAT CAAGTATGTG TACCGTGATG CTGCTGGCAT CAGTCTGCCG CGCTCGACGC GAGAGATGAT TGTCATGCGC GCACCCACGG TGGATGCCAG TTCGCTGCAG TCCGGTGACC TGGTGTTCTT CGCCACCAGT GGCGGCTCGC AGGTCAGCCA TGCCGGCATC TATGTCGGGG ACGGGCGCTT CGTGCATGCA CCTTCCACCG GTGGCACCGT GCGCCTGGAC TACCTGTCGA ACAGCTACTG GGCCAAGGCC TACCTGCAGG CCAAGCGGGT GATTCCGCAA GGGCATCTGG CACAGAACCC TTGA
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Protein sequence | MVKMARFAFL SLAALLAACS SRAPAPAPVV QPQVTYSQPS PSPIADDVLI RAIGLVGTPY RWGGNTPDSG FDCSGLIKYV YRDAAGISLP RSTREMIVMR APTVDASSLQ SGDLVFFATS GGSQVSHAGI YVGDGRFVHA PSTGGTVRLD YLSNSYWAKA YLQAKRVIPQ GHLAQNP
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