Gene PP_1666 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1666 
Symbol 
ID1044220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1862311 
End bp1863378 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content67% 
IMG OID637145066 
Producthypothetical protein 
Protein accessionNP_743823 
Protein GI26988398 
COG category[S] Function unknown 
COG ID[COG3249] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.662386 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTTGT TCAATATTCT GGCAGCCGGT TGCCTGGCCC TGATCTCGGC CACTGCCCTG 
GCTGAAAATG TCTCCGGCCT TTATCAGGTG CGCGAGCCGG TCACCGGGCC GGGCGCCGAA
GCCCGTACCG CGGCCACAGT CAAAGCCCTG GATACGTTGG TGCAGCGTCT GACCGGTGAC
CCTAAGGCCG TGCAGAGCCC TGCATTGGCC GAGCTGCGCA AGGACCCACA GCAAATCATC
AACCAGGTGG GCAGCGAAGC CGGCCCGCCC GAGTCGGTAG TGGTCGAGTT CGACCCAGGT
AGCACCGAGC GGGCCTTGCG CAAGGCTGGC CTGGCACTGT GGGGCAGTAA CCGGCCCTCG
ATACTGGGGT GGTGGTTGAA CGACACCGTT GAGGGCAGCA GCCTGGTCGG TGATGGCCAG
GCCAGTGCCC AACCCCTGCG CCGCGCCGCC CAGCACCGTG GTCTGCCGTT GCGCTTGCCG
CTGGCCGACT TGCAGGAGCA GCTGGTCGCC AATGCCAAGC AGATCGAAGG CAACGATCCA
GCGCCGCTGC GCGAAGCTTC CGAGCGCTAC GGCGCCGATG CCTTGCTGGC GGTACATGCC
CAGGAAGCCG ACGGCAAGTG GCAGGGCAAG TGGCAGCTGT GGCTGGGCGA CCAGCGTGAA
CAGGGCACTG CCGAGGGCGC CGACCAGGCC GCCTTGGCTG ACGCGGTGAT GATGGCGGTA
AGCAGCCGCC TGGCGCCACG CTACGTTACC CGGCCGGGTG CCAGCAGCCA GTTGCAGGTG
CAAGTGCAGG GCATGAACCT GCAGCGCTAT GCCGAGCTGG CCCGCGTGCT TGAGCCCTAT
GGCCCACGCT TGCAGGCGGC TGAAGGCACT ACCCTGACCT ACGGGGTTAC GGGCAATCGT
GAACAGCTAC GTGCCCAGCT TGGCCTGGCC AAGCTGCAGG AAGTGCCGGT CGAGCAGGCA
CCGGCGGTGC CGGCCATGCC AGTACCGGCA GTGGACGCCG CAGCCGCGCA GCCCGCGCCT
GCGCAGCCAG CACCCAAGCC GTTCGACGGC TTGCGTTTTC GCTGGTAA
 
Protein sequence
MRLFNILAAG CLALISATAL AENVSGLYQV REPVTGPGAE ARTAATVKAL DTLVQRLTGD 
PKAVQSPALA ELRKDPQQII NQVGSEAGPP ESVVVEFDPG STERALRKAG LALWGSNRPS
ILGWWLNDTV EGSSLVGDGQ ASAQPLRRAA QHRGLPLRLP LADLQEQLVA NAKQIEGNDP
APLREASERY GADALLAVHA QEADGKWQGK WQLWLGDQRE QGTAEGADQA ALADAVMMAV
SSRLAPRYVT RPGASSQLQV QVQGMNLQRY AELARVLEPY GPRLQAAEGT TLTYGVTGNR
EQLRAQLGLA KLQEVPVEQA PAVPAMPVPA VDAAAAQPAP AQPAPKPFDG LRFRW