| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1661 |
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| Symbol | |
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| ID | 1044297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 1856818 |
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| End bp | 1859076 |
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| Gene Length | 2259 bp |
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| Protein Length | 752 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637145061 |
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| Product | dehydrogenase subunit, putative |
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| Protein accession | NP_743818 |
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| Protein GI | 26988393 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.796434 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAATG TACAAACCCA GAACATCGAA ACCGCCGATG TGATCGTGGT GGGCGCCGGC
ATGGCCGGCA GTGTCATGGC CTACCAGTTG GGCCTGGCCG GGTTGAAAGT GCTGGTGCTC
GAATCGGGCC CGGCCATTCC ACCGAATCGC AGCGAGTACC TGGAGCGCTT CTACACCGCG
GTGCTCAAGG CGCCCGAGTC GCCGTACCCA CCTGAGCAGA GCGAGCAGAC CCCGGCCACG
CAGTTCGCGC CACGGGCGAC CATCCAGGAC CTGATCACCT CAGGTAGCCA AGACCCCAAC
AAGGCGCAGA AAAGCTACCT GGTGCAGAAG GGGCCGCACC TGTTCGCCAG CACCTACGAG
CGGGTAGGCG GCGGCACCAT GTGGCACTGG ATGGGCACGG CCCTGCGCCT GTTGCCCAAC
GACTTCCGCA TGCGCACTGC GTACAACGTC GGGGTCGACT GGCCGATCAG TTACGACGAC
CTGCAGACCG CCTACTGCCG CGCCGAGGAG GAGATGGGCG TGTCCGCCGA TGTCGCCTCG
CAGACCTACC TGGGCGTGAC CTTCCCGCAG GGCTACAAAT ACAGCATGCA TGGCATCCCG
CCGTCGCTGG TCGACCAGGG CCTGGGCAAG CACGTCACGG GCACCGTGTA CCAAAGCCCG
GAGAAGGGGC CTGACGGCAA GCCGTACCCA GGTGTCACCC TCAATGTCCG GCAAACCCCG
GCCGGGCGCA ACTCGCAGAA TGATAACGGC CGTCGGGTGT GCGCTGGCAA CACCAGCTGC
ACGCCGATCT GCCCGATCCA GGCCAAGTAC GACGCCACCG TGACCATGGC CAAGGCACTG
GATACCGGCA ACGTGCGCAT CCTCTACCAG ACCGTTGCAA GCCAAGTGCA GGTCGATGCC
AATGGGGTCA CGGGCATCGA TTTCATTCAG TACCAGAACA ATGGTACGCG CCAGAACGGC
ACGGCCCAGG GCAAGCGCTA CGTGATCGCC GCCCACGCGA TCGAAACACC GAAGCTGCTG
CTCAACTCCA TCGGCCCGAA CAGCCCTAAA GGGGTTGCCA ACAGCAGCGG CCAGGTCGGC
CAGGCATTGG CTGACCACCC GGTGTACCTG GCCTGGGGCC TGATGCCCGA AGGCAAGCCG
CTGTTCCCGT TCCGGGGGCC GTTGTCTACC TCGGGGATCG AGGACATGCG CGATGGCCCG
TTCCGCAGCC AGCGTGCCGC CTGGCGTATC GAAATCGGCA ACGAGGGCTG GAACTGGTCG
GTGAACGACC CCTACACCTC GGTCTGTGAT TTCATCGACG GCACCAACCA CGGCGGCGCT
AACCCCAGCA ATCTGGCGTT GTCCGGCCAG GCGCTGGTGC AGCAGCTCAA CAGCGTGCTG
ACCCGCCAGT TCCGTCTGGG CTTCTTGGTC GAGCAGGTGG AGAAAGACCC CGATAATGCG
CTGTGCCGGG TGGAGAGGAG TACGGAGTTC TCCGACGGAT TGGGCCTGCC TCGGCCGCAG
ATCACCTACG AACTGTCCGA CTACACCAAG GAGGGTTTCA AGCAGGCGCG CCTGGCCGCT
ACGTACATCA TCACCGAGCT GATGGGCGCT ACCGAGCTGA CCGACCTGAA CCCTAAGCTC
GAGCCCGGCT CGCAAACGGT GTTCGAGTAC GACGGCCAGA ACTACGCGTT CTACGGCGCT
GGCCACCTGA TGGGCACCTA CCGCATGGGC TCGGACCGCA CCAAGTCGGT GGTGGACAAG
GACCAGCGCA GCTGGGACCA CCCCAACCTG TTCCTGGTCG GCGACGGCGT GTTCCCCACT
ACCGGCACCG CCAACCCGAC CTTGACCATC ACCGCGTTGA CGTTCCAGGC CGCCGACGTG
GTGGCCAGCG ACCTGCTCAA GCGCACCGTG CAGGTGCAGG CCAACCAGGC ATGGCAGGGC
ACGGGCATGC AGGTCAATGG GCAGAGCTGG CAGTTGGCGG TATGCACGGG CGGGCAGTGG
ACGGCGAACC CGGCCACCGG CATGGTTGGC GCGGCGGGCA ACCCAAGGTT GATCGCCAAG
CCCGGCTATG CCTTGCCTGG TCAACCGGAA GGGGCGTTGA TCGGGCGTAT CGGCAACAGC
GGCGTGCCGT TCCTGGTCGG CAACCAGGTG CAATTGCCGC GTGGCCAGCA AGGTGAGTTG
CAGCTGTGCA TCAATGACGA CCTGGACGGG CGTTACGGGG CTGGCCTGAG CGATAACCTG
GGCAGCCTGT CGGTAGAGGT GCGTTTCGGG GCGGTGTAG
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| Protein sequence | MSNVQTQNIE TADVIVVGAG MAGSVMAYQL GLAGLKVLVL ESGPAIPPNR SEYLERFYTA
VLKAPESPYP PEQSEQTPAT QFAPRATIQD LITSGSQDPN KAQKSYLVQK GPHLFASTYE
RVGGGTMWHW MGTALRLLPN DFRMRTAYNV GVDWPISYDD LQTAYCRAEE EMGVSADVAS
QTYLGVTFPQ GYKYSMHGIP PSLVDQGLGK HVTGTVYQSP EKGPDGKPYP GVTLNVRQTP
AGRNSQNDNG RRVCAGNTSC TPICPIQAKY DATVTMAKAL DTGNVRILYQ TVASQVQVDA
NGVTGIDFIQ YQNNGTRQNG TAQGKRYVIA AHAIETPKLL LNSIGPNSPK GVANSSGQVG
QALADHPVYL AWGLMPEGKP LFPFRGPLST SGIEDMRDGP FRSQRAAWRI EIGNEGWNWS
VNDPYTSVCD FIDGTNHGGA NPSNLALSGQ ALVQQLNSVL TRQFRLGFLV EQVEKDPDNA
LCRVERSTEF SDGLGLPRPQ ITYELSDYTK EGFKQARLAA TYIITELMGA TELTDLNPKL
EPGSQTVFEY DGQNYAFYGA GHLMGTYRMG SDRTKSVVDK DQRSWDHPNL FLVGDGVFPT
TGTANPTLTI TALTFQAADV VASDLLKRTV QVQANQAWQG TGMQVNGQSW QLAVCTGGQW
TANPATGMVG AAGNPRLIAK PGYALPGQPE GALIGRIGNS GVPFLVGNQV QLPRGQQGEL
QLCINDDLDG RYGAGLSDNL GSLSVEVRFG AV
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