| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1654 |
|---|
| Symbol | cysM |
|---|
| ID | 1044388 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 1848556 |
|---|
| End bp | 1849455 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637145054 |
|---|
| Product | cysteine synthase B |
|---|
| Protein accession | NP_743811 |
|---|
| Protein GI | 26988386 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0031] Cysteine synthase |
|---|
| TIGRFAM ID | [TIGR01136] cysteine synthases
[TIGR01138] cysteine synthase B |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0738123 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.776685 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTTGC AGTACCCAAC CATCGCCGAT TGCGTCGGCA ATACGCCACT GGTTCGCCTG
CAGCGCATCG CTGGCGAAAC CAGCAATACC CTCCTGCTCA AGCTCGAAGG TAACAATCCT
GCCGGCTCGG TGAAAGACCG CCCGGCCCTG TCGATGATCG CTCGCGCCGA ATTGCGGGGC
CAGATCAAGC CAGGCGATAC CCTGATCGAA GCCACCTCCG GCAACACGGG CATCGCCCTG
GCGATGGCGG CGGCGATCAA GGGCTACAAG ATGATCCTGA TCATGCCCGA CAACTCCACC
GCCGAGCGCA AGGCCGCCAT GACGGCCTAT GGCGCCGAGC TGATCCTGGT GACCAAGGAG
GAGGGGATGG AAGGCGCCCG TGACCTGGCC GAGAAGCTGC AGGCCGAAGG CCGTGGCCTG
GTGCTCGACC AGTTCGCCAA CGGCGACAAC CCGATCGCCC ACTACAACAG CACCGGCCCG
GAGATCTGGC AGCAGACCCA GGGCACCATT ACCCATTTCG TCAGCTCCAT GGGGACCACC
GGTACCATCA TGGGCTGCTC GCAGTACCTC AAGGAACAGA ACCCCGCGGT GCAGATCATC
GGCCTGCAAC CGATGGAAGG CTCGGCTATT CCGGGCATTC GCCGCTGGCC CGAGGAATAT
TTGCCGAAAA TCTTCGACGC CACCCGCGTC GACCGCGTGG TCGACATGTC GCAGCAGGAA
GCCGAAGACA CCACCCGTCG CCTTGCGCGT GAAGAGGGCA TTTTCTGCGG CGTGTCTTCT
GGTGGTGCGG TCGCGGCCAT GTTGCGTCTG TCCCGCGAAG TGGAAAATGC GGTCATGGTT
GCGATCATTT GCGACCGCGG CGACCGTTAT CTGTCCACTG GCCTGTTTGA TCCACGCTAA
|
|---|
| Protein sequence | MTLQYPTIAD CVGNTPLVRL QRIAGETSNT LLLKLEGNNP AGSVKDRPAL SMIARAELRG
QIKPGDTLIE ATSGNTGIAL AMAAAIKGYK MILIMPDNST AERKAAMTAY GAELILVTKE
EGMEGARDLA EKLQAEGRGL VLDQFANGDN PIAHYNSTGP EIWQQTQGTI THFVSSMGTT
GTIMGCSQYL KEQNPAVQII GLQPMEGSAI PGIRRWPEEY LPKIFDATRV DRVVDMSQQE
AEDTTRRLAR EEGIFCGVSS GGAVAAMLRL SREVENAVMV AIICDRGDRY LSTGLFDPR
|
|---|
| |