| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1649 |
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| Symbol | ldhA |
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| ID | 1044740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 1840970 |
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| End bp | 1841998 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637145049 |
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| Product | D-lactate dehydrogenase |
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| Protein accession | NP_743806 |
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| Protein GI | 26988381 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.36281 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.130126 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCCACC CAAGACATGC ATTGCAAAGG AGTTCGACCA TGCGCGCCCT GTTGTTCAGC
AGCCAGCACT ACGATCAGGA AAGCTTCACC AAGGCTGCCG GCGGCACCGC CCTGGAGCTG
CATTTCCAGC CCGCCCGCCT GACCCTCGAC ACCGCCGCCC TGGCAGATGG CTTTGAGGTG
GTCTGCGCCT TCATCAATGA CGAACTCGAC GCGCCGGTGC TGCAGCGCCT GGCCGCCGCT
GGCACGCGGT TGATCGCCCT GCGCTCGGCC GGCTACAACC ACGTCGACCT GGCCGCCGCC
CAGCGCTTGG GGCTGGCCGT GGTGCGGGTG CCGGCCTACT CGCCACACGC CGTTGCCGAG
CATGCCGTGG CGCTCATCCT GGCACTCAAC CGGCGTCTGC ATCGGGCCTA CAACCGCACC
CGCGAAGGTG ACTTCACCCT GCACGGGCTG ACCGGCTTCG ACCTGCACGG GAAAACCGTC
GGGGTGGTCG GTACCGGCCA GATCGGGGTC GCCTTCGCTC GCATCATGGC CGGTTTCGGC
TGCCAGCTGC TGGCTTACGA CCCCTACCCC AACCCAGAGC TGCTGGCCCT TGGCGCCCGC
TACCTGCCCC TGCCCGAGCT ATTGCGCGAA GCCCGCATCA TCAGCCTGCA CTGCCCACTG
ACCGAGCACA CTCGCCACCT GATCAACGCG CAAAGCCTGG CCCAGTTGCA GCCCGGCGCC
ATGCTGATCA ACACCGGTCG CGGTGCGTTG GTCGACACCC CGGCGCTGAT CGACGCACTG
AAAAGCGGCC AGCTTGGCTA CCTGGGCCTG GACGTCTACG AAGAAGAAGC CCAACTGTTC
TTCGAGGACC GCTCCGACCT GCCCTTGCAA GACGATGTGC TGGCTCGGCT GCTGACCTTC
CCCAACGTGA TCATCACCGC CCACCAGGCT TTCCTCACCC GCGAGGCGCT GGATGCCATT
GCCGCGACCA CACTGGACAA CATCAACCGC TGGGCGGCAG GCAATCCACA GAACCTGGTG
ATGGGTTAA
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| Protein sequence | MTHPRHALQR SSTMRALLFS SQHYDQESFT KAAGGTALEL HFQPARLTLD TAALADGFEV
VCAFINDELD APVLQRLAAA GTRLIALRSA GYNHVDLAAA QRLGLAVVRV PAYSPHAVAE
HAVALILALN RRLHRAYNRT REGDFTLHGL TGFDLHGKTV GVVGTGQIGV AFARIMAGFG
CQLLAYDPYP NPELLALGAR YLPLPELLRE ARIISLHCPL TEHTRHLINA QSLAQLQPGA
MLINTGRGAL VDTPALIDAL KSGQLGYLGL DVYEEEAQLF FEDRSDLPLQ DDVLARLLTF
PNVIITAHQA FLTREALDAI AATTLDNINR WAAGNPQNLV MG
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