Gene PP_1646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1646 
Symbol 
ID1044754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1839600 
End bp1840064 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content62% 
IMG OID637145046 
Productalkyl hydroperoxide reductase/thiol specific antioxidant/ Mal allergen 
Protein accessionNP_743803 
Protein GI26988378 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0526] Thiol-disulfide isomerase and thioredoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.710135 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.321595 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAGGC GTCTGGCAGC AGTACTGGCC ATCACCGCGA GCCTGTTGCT CGGTGGTTGC 
GGTGCCGATT ACGGCGTGGA CCAACACGGT AATACGGTTA AGGCCGAACA GATCGAAGGG
CACTGGCTGG TGCTCAACTA TTGGGCTGAA TGGTGCGGAC CGTGCCGTAC CGAAATCCCG
GAACTGAACG CGGCGGCCAA GCAATGGGCG GCTGATGGCG TCAAGGTGGT GGGGGTGAAC
TTCGATGGCC TGCAGGGGCA GGACCTGAAG CAGGCTGCCG AAACCCTGGG TATCGGTTTC
ACCGTGCTTG CCCAGGACCC GGCCGAGCGC TATGACCTGC CGCGCAGCGA GGCGTTGCCG
GTGACCTACA TCATCGACGA CAAGGGCAAG GTGCGTGAGC AGTTGATGGG CGAGCAGACC
CTGGAAGGGT TGCAGGCCAA GATCAAGGCC CTGAAAGGCG CCTGA
 
Protein sequence
MARRLAAVLA ITASLLLGGC GADYGVDQHG NTVKAEQIEG HWLVLNYWAE WCGPCRTEIP 
ELNAAAKQWA ADGVKVVGVN FDGLQGQDLK QAAETLGIGF TVLAQDPAER YDLPRSEALP
VTYIIDDKGK VREQLMGEQT LEGLQAKIKA LKGA