Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1642 |
Symbol | |
ID | 1044775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 1837378 |
End bp | 1838049 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637145042 |
Product | hypothetical protein |
Protein accession | NP_743799 |
Protein GI | 26988374 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2818] 3-methyladenine DNA glycosylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.32013 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGATT ACCAGTGGTT GCATGAGTAT TGCCTGAACC GCTTTGGTTC GGCCCAGGCG CTGGAGGCTT TCCTGCCGCA GCCGCGCACG CCGGCGCAAC TGCGCGACAT CAGTGACGAC CGCTACCTGT CGACATTGGC CCTGCGCGTG TTCCGCGCGG GGCTCAAGCA CAGCCTGGTG GATGCCAAGT GGCCGGCGTT CGAGCAGGTG TTCTTTGGCT TCGACCCGGA GAAAGTGGTG CTGATGGGCG CCGAGCATCT GGAGCGGTTG ATGCAGGATG AGCGCATTAT CCGCCACCTG GGCAAGCTCA AGAGCGTGCC ACGCAATGCG CAAATGGTGC TGGATATCGC CAAGGCGCAT GGCAGTTTTG GTGCATTCAT CGCCGATTGG CCAGTGACCG ACATTGTCGG CTTGTGGAAG TACCTGGCCA AGCACGGCAA CCAGTTGGGC GGGTTGTCGG CGCCACGGTT CTTGCGCATG GTCGGCAAGG ACACGTTCAT CCCGACCGAT GACATGGCAG CGGCGTTGAT TGCGCAGAAG GTGATCGACA AGCAGCCAAC CAGCCAGCGC GACCTGGCTC TGGTGCAGCA GGCGTTCAAC CAGTGGCATG CAGAGAGCGG GCGGCCGCTG TGCCAGTTGT CGGTGATGCT GGCGCACACC GTCAACCATT GA
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Protein sequence | MRDYQWLHEY CLNRFGSAQA LEAFLPQPRT PAQLRDISDD RYLSTLALRV FRAGLKHSLV DAKWPAFEQV FFGFDPEKVV LMGAEHLERL MQDERIIRHL GKLKSVPRNA QMVLDIAKAH GSFGAFIADW PVTDIVGLWK YLAKHGNQLG GLSAPRFLRM VGKDTFIPTD DMAAALIAQK VIDKQPTSQR DLALVQQAFN QWHAESGRPL CQLSVMLAHT VNH
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