Gene PP_1642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1642 
Symbol 
ID1044775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1837378 
End bp1838049 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content62% 
IMG OID637145042 
Producthypothetical protein 
Protein accessionNP_743799 
Protein GI26988374 
COG category[L] Replication, recombination and repair 
COG ID[COG2818] 3-methyladenine DNA glycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.32013 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGATT ACCAGTGGTT GCATGAGTAT TGCCTGAACC GCTTTGGTTC GGCCCAGGCG 
CTGGAGGCTT TCCTGCCGCA GCCGCGCACG CCGGCGCAAC TGCGCGACAT CAGTGACGAC
CGCTACCTGT CGACATTGGC CCTGCGCGTG TTCCGCGCGG GGCTCAAGCA CAGCCTGGTG
GATGCCAAGT GGCCGGCGTT CGAGCAGGTG TTCTTTGGCT TCGACCCGGA GAAAGTGGTG
CTGATGGGCG CCGAGCATCT GGAGCGGTTG ATGCAGGATG AGCGCATTAT CCGCCACCTG
GGCAAGCTCA AGAGCGTGCC ACGCAATGCG CAAATGGTGC TGGATATCGC CAAGGCGCAT
GGCAGTTTTG GTGCATTCAT CGCCGATTGG CCAGTGACCG ACATTGTCGG CTTGTGGAAG
TACCTGGCCA AGCACGGCAA CCAGTTGGGC GGGTTGTCGG CGCCACGGTT CTTGCGCATG
GTCGGCAAGG ACACGTTCAT CCCGACCGAT GACATGGCAG CGGCGTTGAT TGCGCAGAAG
GTGATCGACA AGCAGCCAAC CAGCCAGCGC GACCTGGCTC TGGTGCAGCA GGCGTTCAAC
CAGTGGCATG CAGAGAGCGG GCGGCCGCTG TGCCAGTTGT CGGTGATGCT GGCGCACACC
GTCAACCATT GA
 
Protein sequence
MRDYQWLHEY CLNRFGSAQA LEAFLPQPRT PAQLRDISDD RYLSTLALRV FRAGLKHSLV 
DAKWPAFEQV FFGFDPEKVV LMGAEHLERL MQDERIIRHL GKLKSVPRNA QMVLDIAKAH
GSFGAFIADW PVTDIVGLWK YLAKHGNQLG GLSAPRFLRM VGKDTFIPTD DMAAALIAQK
VIDKQPTSQR DLALVQQAFN QWHAESGRPL CQLSVMLAHT VNH