Gene PP_1629 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1629 
SymbolrecA 
ID1044818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1827143 
End bp1828210 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content59% 
IMG OID637145029 
Productrecombinase A 
Protein accessionNP_743786 
Protein GI26988361 
COG category[L] Replication, recombination and repair 
COG ID[COG0468] RecA/RadA recombinase 
TIGRFAM ID[TIGR02012] protein RecA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.849206 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.20246 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGACA ACAAGAAGCG CGCCTTGGCT GCGGCCCTGG GTCAGATCGA ACGCCAATTC 
GGTAAAGGCG CGGTCATGCG CATGGGTGAC CATGAGCGTC AAGGCATTCC GGCCATCTCC
ACCGGCTCGC TGGGGCTGGA TATCGCCCTG GGCATCGGCG GTCTGCCAAA AGGCCGTATC
GTCGAGATCT ACGGCCCGGA ATCGTCGGGT AAGACCACGC TGACCCTGTC TGTCATCGCT
GAAGCGCAAA AGAACGGTGC TACCTGCGCC TTCGTCGACG CCGAACATGC CCTTGACCCT
GAGTACGCCG GCAAGCTGGG CGTCAACGTC GATGACCTGC TGGTTTCGCA GCCGGACACC
GGTGAGCAGG CCCTTGAAAT CACCGACATG CTGGTGCGTT CCAACGCGGT CGACGTGATC
ATTGTCGACT CCGTTGCCGC GCTGGTACCG AAGGCCGAGA TCGAAGGCGA GATGGGTGAC
ATGCATGTGG GCCTGCAGGC CCGCCTGATG TCCCAGGCAC TGCGTAAGAT CACCGGTAAC
ATCAAGAACG CGAACTGCCT GGTCATCTTC ATCAACCAGA TCCGTATGAA GATCGGTGTG
ATGTTCGGCA GCCCGGAAAC CACTACCGGT GGTAACGCCC TGAAGTTCTA TGCTTCGGTC
CGTCTGGACA TCCGCCGTAC CGGCGCGGTC AAGGAAGGCG ACGAAGTGGT CGGCAGCGAA
ACCCGCGTCA AGATCGTCAA GAACAAGGTC TCGCCTCCGT TCCGTCAGGC TGAGTTCCAG
ATTCTTTACG GGAAAGGTAT CTACCGTAAC GGCGAGATCA TTGATCTGGG GGTATCTCAG
GGCCTGGTCG AAAAGTCCGG CGCCTGGTAC GCCTACCAAG GCAACAAGAT CGGTCAAGGC
AAAGCCAACG CTGCCAAGTA CCTGGCTGAG AACCCGGCTA TTGGTGCCGA GATCGAGAAG
CAGATTCGTG AGAAGTTGCT GAAAGCGGGT GCTGCTGCTG AAGCCGGCAA AGCTGCTGCT
GCTGAAGCTG ATGCCGATGA CATGGCCGAC GCTGACGCCG GTTATTGA
 
Protein sequence
MDDNKKRALA AALGQIERQF GKGAVMRMGD HERQGIPAIS TGSLGLDIAL GIGGLPKGRI 
VEIYGPESSG KTTLTLSVIA EAQKNGATCA FVDAEHALDP EYAGKLGVNV DDLLVSQPDT
GEQALEITDM LVRSNAVDVI IVDSVAALVP KAEIEGEMGD MHVGLQARLM SQALRKITGN
IKNANCLVIF INQIRMKIGV MFGSPETTTG GNALKFYASV RLDIRRTGAV KEGDEVVGSE
TRVKIVKNKV SPPFRQAEFQ ILYGKGIYRN GEIIDLGVSQ GLVEKSGAWY AYQGNKIGQG
KANAAKYLAE NPAIGAEIEK QIREKLLKAG AAAEAGKAAA AEADADDMAD ADAGY