| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1614 |
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| Symbol | ispD |
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| ID | 1044895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 1810682 |
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| End bp | 1811389 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637145014 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | NP_743771 |
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| Protein GI | 26988346 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.274971 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.972478 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGATA TCTTGCCGGC CTTCTGGGCC GTGATCCCTG CGGCGGGTGT AGGTGCCCGC
ATGGCTGCCG ACCGCCCCAA GCAATACCTG GAGCTGGCTG GGCAGACCCT TCTCGAGCAC
AGCCTCGACT GTTTTCTTGG CCACCCGGCG CTCAAGGGCG TGGTGGTCAG CATTGCCGAA
GATGACCCGT ACTGGCCTGG CCTGCGCTGC GCCAGCGACC CACGCATCCA CTGCGCGGCG
GGCGGGCGTG AACGCGCTGA CTCGGTGCTT AACGCCTTGC TGGTGCTGCA TGCCCAGGGG
GCGGCGGACA GCGACTGGGT GCTGGTGCAC GATGCTGCGC GGCCGAACCT GGCGCGCAGC
GACCTGGACA AGCTGTTGTC GGAGCTGGCG GACGACCCGG TGGGTGGCCT GCTGGCGGTG
CCGGCGCGCG ACACCCTCAA GCGTGCCGAC AGCCATGGCC GGGTGAGTGC TACCGTGGAC
CGCAGCACCA TCTGGCAGGC GTACACACCG CAGATGTTCC GCCTTGGAGC GTTGCATCGG
GCGCTGGCTG AGTGCCTGGT GTCGGATGTG GTGGTGACCG ACGAAGCCTC GGCCATCGAA
TGGTCCGGTC AGGCGCCGCG GCTGGTGGAA GGGCGCAGTG ACAACATAAA GGTGACCCGG
CCCGAAGATC TCGAATGGTT GCGCCAGCGC TGGGCGGGTA AACGCTGA
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| Protein sequence | MIDILPAFWA VIPAAGVGAR MAADRPKQYL ELAGQTLLEH SLDCFLGHPA LKGVVVSIAE
DDPYWPGLRC ASDPRIHCAA GGRERADSVL NALLVLHAQG AADSDWVLVH DAARPNLARS
DLDKLLSELA DDPVGGLLAV PARDTLKRAD SHGRVSATVD RSTIWQAYTP QMFRLGALHR
ALAECLVSDV VVTDEASAIE WSGQAPRLVE GRSDNIKVTR PEDLEWLRQR WAGKR
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