Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1601 |
Symbol | lpxD |
ID | 1044945 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 1795689 |
End bp | 1796744 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637145001 |
Product | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
Protein accession | NP_743758 |
Protein GI | 26988333 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
TIGRFAM ID | [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGTGA CCATGACGCT AGGCCAGCTG GCCGAGGTAC TCGGAGCTAC CCTCAAGGGG CCCGAGGCGC TGCAGATTAC CGGGTTGGCC ACCTTGCAGG AGGCTGGCCC GACGCAGTTG AGCTTCCTCG CCAACCCGCA GTACCGCAAG TACCTGGATA ACAGCCAGGC CGGCGCGGTG CTGCTCAAGG CTGCGGATGC CGAAAGCTTT GCCGGCAATA CCCTGGTCGT GGCGGACCCG TACCTGGCTT ACGCGCGAAT TTCCCACCTG TTCGATCCCA AACCCAAGGC TGAGGCGGGT ATACATCCCA GCGCCGTGGT GGCGGAAGAT GCCCAGGTGG ACGCCAGCGC CAGCATCGGG CCGTTCGCGG TCATCGAAAG TGGTGCGCGC ATCGGCGCCA ACGTCAGCAT CGGCGCACAC TGCTTCATCG GTGCCCGCTG TGTGGTCGGT GAAGGTGGTT GGCTGGCACC GCGGGTCACG CTGTATCACG ACGTGACCAT CGGTAAGCGT GTGGTCATCC AGTCGGGTGC CGTGATCGGC GGCGAGGGCT TCGGCTTTGC CAACGAAAAG GGCATCTGGC GCAAGATTGC GCAGATCGGC GGCGTCACCA TTGGTGATGA CGTGGAGATC GGCGTCAATA CTGCTGTCGA CCGTGGCGCG CTGTCCGACA CCCGGATCGG CGACGGGGTC AAGCTGGATA ACCAGATCCA GATCGCTCAC AACGTACAGA TCGGTGATCA CACTGCCATG GCCGCTTGCG TCGGAATCTC CGGCAGCACG CGCATCGGCA AGCACTGCAT GCTGGCCGGG GGTGTGGGGC TGGTTGGGCA CATCGATATT TGCGATAACG TTTTCGTTTC CGGAATGACC ATGGTTACCC GTTCGATCAC TGAACCGGGT TCCTATTCTT CCGGCACTGC CATGCAGCCG CTGGCTGACT GGCGCAAGAG CGCCGCGCGT ATCCGCCACC TGGACGACAT GGCCAAGCGT CTCCAGCAGC TGGAAAAACG CGTCGATACC GTGACCTCAG GTGGCCTGCC GACATCAGAA GGCTGA
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Protein sequence | MSVTMTLGQL AEVLGATLKG PEALQITGLA TLQEAGPTQL SFLANPQYRK YLDNSQAGAV LLKAADAESF AGNTLVVADP YLAYARISHL FDPKPKAEAG IHPSAVVAED AQVDASASIG PFAVIESGAR IGANVSIGAH CFIGARCVVG EGGWLAPRVT LYHDVTIGKR VVIQSGAVIG GEGFGFANEK GIWRKIAQIG GVTIGDDVEI GVNTAVDRGA LSDTRIGDGV KLDNQIQIAH NVQIGDHTAM AACVGISGST RIGKHCMLAG GVGLVGHIDI CDNVFVSGMT MVTRSITEPG SYSSGTAMQP LADWRKSAAR IRHLDDMAKR LQQLEKRVDT VTSGGLPTSE G
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