Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1600 |
Symbol | ompH |
ID | 1044989 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 1795184 |
End bp | 1795687 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637145000 |
Product | outer membrane chaperone Skp (OmpH) |
Protein accession | NP_743757 |
Protein GI | 26988332 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2825] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGTAAAT TGGCTCAATT GGCCGTAGTG GCCGCGGCGC TGGTCGCCAC CCCGGCTTTC GCCGAAATGA AGGTTGCCGT CCTGAACTAC CAGATGGCCC TGCTCGAGTC GGATGCCGCC AAGAAGTATG CGGTTGATGC CGAGAAGAAA TTCGGTCCGC AACTGACCAA GCTGAAAAGC CTGGAAAGCA GTGCCAAGGG CATCCAGGAC CGCCTGATCA AGGGCGGCGA CAAGATGCAG CAGCAGGAGC GTGAGCGCCT GGAGCTCGAG TTCAAGCAAA AGGCCCGCGA TTTCCAGTTC CAGTCCAAGG AACTGAACGA AGCCAAGGCC GTTGCTGATC GCGACATGCT CAAGCAACTG AAGCCGAAGC TGGATGGTGC TGTCGAGGAA GTGATCAAGA AGGGCGGCTA CGACCTGGTC CTCGAGCGTG GTGCGGTCAT CGATGTCAAA CCTCAGTACG ACATCACCCG CCAAGTCATC GAGCGCATGA ACCAAGCCCG TTGA
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Protein sequence | MRKLAQLAVV AAALVATPAF AEMKVAVLNY QMALLESDAA KKYAVDAEKK FGPQLTKLKS LESSAKGIQD RLIKGGDKMQ QQERERLELE FKQKARDFQF QSKELNEAKA VADRDMLKQL KPKLDGAVEE VIKKGGYDLV LERGAVIDVK PQYDITRQVI ERMNQAR
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