| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1597 |
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| Symbol | dxr |
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| ID | 1045056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 1790067 |
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| End bp | 1791281 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637144997 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | NP_743754 |
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| Protein GI | 26988329 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.888046 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGCTGCC GAATGGGGTG TGATGTGAGT CGCCCGCAAC GTATTACCGT GCTCGGGGCC
ACCGGCTCCA TTGGCCTGAG TACGCTGGAT GTGATTGCGC GTCATCCTGA CCGTTATCAA
GCGTTCGCCC TCACTGGCTA TTCGCGCATC GACGAGCTGT TGGCGCTATG CGTGCGTCAT
CGTCCGGCCT TCGCTGTGGT GCCGAGCACC GAGGCGGCGG TGAGGTTGCG TGCGAGTCTG
GCTGCGGCCG GTTGCACCAC CGAGGTGCTG GAAGGTGAGG CCGGGCTTTG CCAAGTGGCG
TCGGCCGCTG AAGTGGATGC AGTGATGGCA GCCATTGTCG GTGCTGCCGG CCTGCGCCCC
ACGCTGGCGG CAGTCGAGGC AGGCAAGAAG GTGTTGCTGG CCAACAAGGA AGCACTTGTG
ATGTCCGGCG CACTGTTCAT GGAGGCGGTG CGGCAAAAGG GTGCCGTGCT GCTGCCGATC
GACAGCGAAC ACAACGCTAT CTTCCAGTGC ATGCCAGGCG ACTACGCCCG TGGCCTGAGT
GCCGTCGGTG TGCGCCGGAT CCTGCTTACC GCGTCCGGCG GGCCGTTCCG CGAAACGCCG
GTCGAGGCGC TGCTGGACGT GACTCCGGAG CAAGCCTGTG CGCACCCCAA CTGGTCCATG
GGGCGCAAGA TCTCCGTGGA TTCGGCCAGC ATGATGAACA AAGGCCTCGA GTTGATCGAA
GCCTGCTGGT TGTTCGATGC CGTGCCGTCC AAGGTTGAGG TGGTGGTGCA CCCGCAGAGC
GTGATCCACT CGCTGGTCGA CTACGTGGAC GGTTCGGTAC TCGCGCAGTT GGGCAACCCG
GACATGCGTA CGCCAATCGC CAACGCGTTG GCCTGGCCGG AACGGATCGA TTCCGGGGTT
GCCCCGCTGG ACCTGTTCGC CATCGCCCGT CTGGATTTCC AGGCGCCCGA CGAACAACGC
TTCCCTTGCC TGCGCCTTGC GCGGCAGGCT GCCGAGGCCG GCAACAGCGC GCCTGCCGTG
CTCAATGCGG CCAACGAAGT CGCGGTCCAG GCATTTCTTG AACGGCGCAT CCGCTTCCCG
GAGATCGCGG GTATGATCGA ACAGGTACTC GACCAGGAAC CCGTCGTACC GCTGCCGTCG
CTGGATGCGG TATTTGCCGC CGATCAGCGT GCCCGGGAGC TTTCCCGTGA GTGGCTGAGG
CGTCACGGCC GCTGA
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| Protein sequence | MGCRMGCDVS RPQRITVLGA TGSIGLSTLD VIARHPDRYQ AFALTGYSRI DELLALCVRH
RPAFAVVPST EAAVRLRASL AAAGCTTEVL EGEAGLCQVA SAAEVDAVMA AIVGAAGLRP
TLAAVEAGKK VLLANKEALV MSGALFMEAV RQKGAVLLPI DSEHNAIFQC MPGDYARGLS
AVGVRRILLT ASGGPFRETP VEALLDVTPE QACAHPNWSM GRKISVDSAS MMNKGLELIE
ACWLFDAVPS KVEVVVHPQS VIHSLVDYVD GSVLAQLGNP DMRTPIANAL AWPERIDSGV
APLDLFAIAR LDFQAPDEQR FPCLRLARQA AEAGNSAPAV LNAANEVAVQ AFLERRIRFP
EIAGMIEQVL DQEPVVPLPS LDAVFAADQR ARELSREWLR RHGR
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