| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1595 |
|---|
| Symbol | uppS |
|---|
| ID | 1045122 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 1788524 |
|---|
| End bp | 1789279 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637144995 |
|---|
| Product | undecaprenyl diphosphate synthase |
|---|
| Protein accession | NP_743752 |
|---|
| Protein GI | 26988327 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
|---|
| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.818708 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAGA CCAAGCCAGC GGCGCCGTCC TCGGTGCCGC GTCATGTCGC GATCATCATG
GATGGCAACA ACCGCTGGGC GAAAAAACGC CTGCTGCCCG GCGTGGCCGG GCACAAGGCG
GGTGTGGATG CCGTTCGCGC GGTCATCGAA GTCTGTGCCA AGTCCGGGGT CGAGGTACTG
ACCCTGTTCG CCTTCTCCAG CGAGAACTGG CAGCGCCCTG CCGAAGAGGT CGGTGCGCTG
ATGGAGCTGT TCTTCTCGGC GCTGCGCCGT GAGGCCAAGC GCCTTGACGA GAACAACATC
AGCCTGCGCA TCATCGGCGA CCGTTCGCGT TTCCATCCTG AGCTGCAGGC CGCCATGCGC
GAGGCCGAGG CAGTGACCGC TGGCAACAAC CGTTTCATTC TGCAGATAGC AGCCAACTAC
GGTGGCCAGT GGGACATCGC CCAGGCTGCC CAGCGGCTGG CGCGGGAAGT GCAAGCCGGG
CACCTGCGCC CGGAAGACAT CACCCCGGGT CTGCTGCAGA CCTGCCTGGC AACCGGCGAC
CTGCCGTTAC CGGACCTGTG CATTCGCACC GGTGGCGAGC ACCGCATCAG CAATTTCCTG
TTGTGGCAGC TGGCCTATGC CGAGTTGTAC TTCTCCGACC TCTACTGGCC GGACTTCAAA
CACGAGGCCA TGCGCAATGC CCTGGCCGAT TTCGCTTCGC GCCAGCGCCG CTTCGGTAAG
ACCAGCGAGC AGGTCGAGGC TGGAGCTCGT GCTTAA
|
|---|
| Protein sequence | MEKTKPAAPS SVPRHVAIIM DGNNRWAKKR LLPGVAGHKA GVDAVRAVIE VCAKSGVEVL
TLFAFSSENW QRPAEEVGAL MELFFSALRR EAKRLDENNI SLRIIGDRSR FHPELQAAMR
EAEAVTAGNN RFILQIAANY GGQWDIAQAA QRLAREVQAG HLRPEDITPG LLQTCLATGD
LPLPDLCIRT GGEHRISNFL LWQLAYAELY FSDLYWPDFK HEAMRNALAD FASRQRRFGK
TSEQVEAGAR A
|
|---|
| |